Evidence map›Paper›PMID 33877606›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Biophysical Studies of the Binding of Viral RNA with the 80S Ribosome Using switchSENSE.

Emma Schenckbecher, Guillaume Bec, Taiichi Sakamoto, Benoit Meyer, Eric Ennifar

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Kinetic and Thermodynamic Analyses of RNA-Protein Interactions.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Emma SchenckbecherInstitut de Biologie Moléculaire et Cellulaire, Université de Strasbourg, CNRS, Strasbourg, France.
Guillaume BecInstitut de Biologie Moléculaire et Cellulaire, Université de Strasbourg, CNRS, Strasbourg, France.
Taiichi SakamotoInstitut de Biologie Moléculaire et Cellulaire, Université de Strasbourg, CNRS, Strasbourg, France.
Benoit MeyerInstitut de Biologie Moléculaire et Cellulaire, Université de Strasbourg, CNRS, Strasbourg, France.
Eric EnnifarInstitut de Biologie Moléculaire et Cellulaire, Université de Strasbourg, CNRS, Strasbourg, France. e.ennifar@unistra.fr.
Centre National de la Recherche Scientifique · FRUniversité de Strasbourg · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Translation initiation, in both eukaryotes and bacteria, requires essential elements such as mRNA, ribosome , initiator tRNA, and a set of initiation factors. For each domain of life, canonical mechanisms and signals are observed to initiate protein synthesis. However, other initiation mechanism can be used, especially in viral mRNAs. Some viruses hijack cellular machinery to translate some of their mRNAs through a noncanonical initiation pathway using internal ribosome entry site (IRES), a highly structured RNAs which can directly recruit the ribosome with a restricted set of initiation factors, and in some cases even without cap and initiator tRNA. In this chapter, we describe the use of biosensors relying on electro-switchable nanolevers using the switchSENSE

Indexed as

Biophysical PhenomenaBiosensing TechniquesDicistroviridaeInternal Ribosome Entry SitesKineticsModels, MolecularProof of Concept StudyProtein BiosynthesisRibosome Subunits, Large, EukaryoticRibosome Subunits, Small, EukaryoticRNA, ViralSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsInternal Ribosome Entry SitesRNA, ViralSaccharomyces cerevisiae ProteinsBiophysicsKineticsRibosomeRNAswitchSENSE

Identifiers

PMID33877606
OpenAlexW3152829744

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.