Evidence map›Paper›PMID 33876591›Full record

ArticleJournal of biomedical optics2021

Enhancement of in vivo cardiac photoacoustic signal specificity using spatiotemporal singular value decomposition.

Rashid Al Mukaddim, Ashley M Weichmann, Carol C Mitchell, Tomy Varghese

Open access · goldAbstract read
In one paragraph

Article in Journal of biomedical optics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Rashid Al MukaddimUniversity of Wisconsin-Madison, Department of ECE, Madison, Wisconsin, United States.
Ashley M WeichmannSmall Animal Imaging and Radiotherapy Facility, UW Carbone Cancer Center, Wisconsin, United States.
Carol C MitchellUniversity of Wisconsin School of Medicine and Public Health, Department of Medicine/Division of Car, United States.
Tomy VargheseUniversity of Wisconsin-Madison, Department of ECE, Madison, Wisconsin, United States.
University of Wisconsin–Madison · USUniversity of Wisconsin Carbone Cancer Center · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Christian Capitini · 1985 to 2026
$142.6M
Early Detection of Vascular Dysfunction Using Biomarkers from Lagrangian Carotid Strain ImagingR01HL147866 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI VARGHESE, TOMY · 2020 to 2023
$2.9M
Real-time Ultrasonic Monitoring of Tumor AblationR01CA112192 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI VARGHESE, TOMY · 2007 to 2017
$2.6M
Ultrasonic and Photoacoustic Imaging System for Cancer & Cardiovascular ResearchS10OD018505 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI VARGHESE, TOMY · 2015 to 2015
$908k
NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA112192NHLBI NIH HHS R01 HL147866NIH HHS S10 OD018505
6 · The paper itself

Abstract

significancePhotoacoustic imaging (PAI) can be used to infer molecular information about myocardial health non-invasively in vivo using optical excitation at ultrasonic spatial resolution. For clinical and preclinical linear array imaging systems, conventional delay-and-sum (DAS) beamforming is typically used. However, DAS cardiac PA images are prone to artifacts such as diffuse quasi-static clutter with temporally varying noise-reducing myocardial signal specificity. Typically, multiple frame averaging schemes are utilized to improve the quality of cardiac PAI, which affects the spatial and temporal resolution and reduces sensitivity to subtle PA signal variation. Furthermore, frame averaging might corrupt myocardial oxygen saturation quantification due to the presence of natural cardiac wall motion. In this paper, a spatiotemporal singular value decomposition (SVD) processing algorithm is proposed to reduce DAS PAI artifacts and subsequent enhancement of myocardial signal specificity.

aimDemonstrate enhancement of PA signals from myocardial tissue compared to surrounding tissues and blood inside the left-ventricular (LV) chamber using spatiotemporal SVD processing with electrocardiogram (ECG) and respiratory signal (ECG-R) gated in vivo murine cardiac PAI. APPROACH: In vivo murine cardiac PAI was performed by collecting single wavelength (850 nm) photoacoustic channel data on eight healthy mice. A three-dimensional (3D) volume of complex PAI data over a cardiac cycle was reconstructed using a custom ECG-R gating algorithm and DAS beamforming. Spatiotemporal SVD was applied on a two-dimensional Casorati matrix generated using the 3D volume of PAI data. The singular value spectrum (SVS) was then filtered to remove contributions from diffuse quasi-static clutter and random noise. Finally, SVD processed beamformed images were derived using filtered SVS and inverse SVD computations.

resultsQualitative comparison with DAS and minimum variance (MV) beamforming shows that SVD processed images had better myocardial signal specificity, contrast, and target detectability. DAS, MV, and SVD images were quantitatively evaluated by calculating contrast ratio (CR), generalized contrast-to-noise ratio (gCNR), and signal-to-noise ratio (SNR). Quantitative evaluations were done at three cardiac time points (during systole, at end-systole (ES), and during diastole) identified from co-registered ultrasound M-Mode image. Mean CR, gCNR, and SNR values of SVD images at ES were 245, 115.15, and 258.17 times higher than DAS images with statistical significance evaluated with one-way analysis of variance.

conclusionsOur results suggest that significantly better-quality images can be realized using spatiotemporal SVD processing for in vivo murine cardiac PAI.

Indexed as

AlgorithmsImage Processing, Computer-AssistedAnimalsMicePhantoms, ImagingSignal-To-Noise RatioUltrasonographydelay-and-sum beamformingphotoacoustic imagingpreclinical murine cardiac photoacoustic imagingsingular value decompositionspatiotemporal singular value decomposition processing

Identifiers

PMID33876591
PMCPMC8054608
OpenAlexW3156883209

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.