Evidence map›Paper›PMID 33875864›Full record

ArticleNature genetics2021

Large-scale sequencing of flatfish genomes provides insights into the polyphyletic origin of their specialized body plan.

Zhenming Lü, Li Gong, Yandong Ren, Yongjiu Chen, Zhongkai Wang, Liqin Liu, Haorong Li, Xianqing Chen, Zhenzhu Li, Hairong Luo and 16 more

Abstract read
In one paragraph

Article in Nature genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Bony fish genomes: Status and gaps.Journal of fish biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Zhenming Lü *National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.ORCID http://orcid.org/0000-0002-2861-2944
Li Gong *National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.
Yandong Ren *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Yongjiu Chen *National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.
Zhongkai Wang *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.ORCID http://orcid.org/0000-0003-0578-5735
Liqin Liu *National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.
Haorong Li *School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Xianqing ChenSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Zhenzhu LiSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Hairong LuoCAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China.
Hui JiangNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.
Yan ZengState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Yifan WangNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.
Kun WangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Chen ZhangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Haifeng JiangKey Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Wenting WanSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Yanli QinSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China.
Jianshe ZhangNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.
Liang ZhuState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Wei ShiCAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China.
Shunping HeKey Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Bingyu MaoState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Wen WangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China. wwang@mail.kiz.ac.cn.ORCID http://orcid.org/0000-0002-7801-2066
Xiaoyu KongCAS Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China. xykong@scsio.ac.cn.ORCID http://orcid.org/0000-0003-0010-7425
Yongxin LiSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'an, China. yxli28science@sina.com.ORCID http://orcid.org/0000-0002-9555-1387

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolutionary and genetic origins of the specialized body plan of flatfish are largely unclear. We analyzed the genomes of 11 flatfish species representing 9 of the 14 Pleuronectiforme families and conclude that Pleuronectoidei and Psettodoidei do not form a monophyletic group, suggesting independent origins from different percoid ancestors. Genomic and transcriptomic data indicate that genes related to WNT and retinoic acid pathways, hampered musculature and reduced lipids might have functioned in the evolution of the specialized body plan of Pleuronectoidei. Evolution of Psettodoidei involved similar but not identical genes. Our work provides valuable resources and insights for understanding the genetic origins of the unusual body plan of flatfishes.

Indexed as

PhylogenySequence Analysis, DNAAmino Acid SequenceAnimal FinsAnimalsBiocatalysisEvolution, MolecularFlatfishesGene Expression RegulationMolecular Sequence AnnotationMutationOrgan SizeSpecies Specificity

Identifiers

PMID33875864
PMCPMC8110480

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.