Evidence map›Paper›PMID 33874978›Full record

ReviewGenome biology2021

Personalized genome structure via single gamete sequencing.

Ruqian Lyu, Vanessa Tsui, Davis J McCarthy, Wayne Crismani

Open access · goldAbstract readReview
In one paragraph

Review in Genome biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. HLA Genetics for the Human Diseases.Advances in experimental medicine and biology · 2024
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ruqian Lyu *Bioinformatics and Cellular Genomics, St. Vincent's Institute of Medical Research, Melbourne, Australia.ORCID 0000-0002-7736-6612
Vanessa Tsui *DNA Repair and Recombination Laboratory, St. Vincent's Institute of Medical Research, Melbourne, Australia.ORCID 0000-0001-5208-198X
Davis J McCarthyBioinformatics and Cellular Genomics, St. Vincent's Institute of Medical Research, Melbourne, Australia. dmccarthy@svi.edu.au.ORCID 0000-0002-2218-6833
Wayne CrismaniDNA Repair and Recombination Laboratory, St. Vincent's Institute of Medical Research, Melbourne, Australia. wcrismani@svi.edu.au.ORCID 0000-0003-0143-8293
The University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic maps have been fundamental to building our understanding of disease genetics and evolutionary processes. The gametes of an individual contain all of the information required to perform a de novo chromosome-scale assembly of an individual's genome, which historically has been performed with populations and pedigrees. Here, we discuss how single-cell gamete sequencing offers the potential to merge the advantages of short-read sequencing with the ability to build personalized genetic maps and open up an entirely new space in personalized genetics.

Indexed as

GenomeHigh-Throughput Nucleotide SequencingAnimalsChromosome MappingComputational BiologyData Interpretation, StatisticalGenetic HeterogeneityGenomicsGerm CellsHumansPrecision MedicineReproducibility of ResultsSensitivity and SpecificitySingle-Cell AnalysisWhole Genome Sequencing

Identifiers

PMID33874978
PMCPMC8054432
OpenAlexW3155104562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.