Evidence map›Paper›PMID 33874895›Full record

ArticleBMC genomics2021

Molecular characterization of cytidine monophospho-N-acetylneuraminic acid hydroxylase (CMAH) gene and frequency of blood types in stray cats of İzmir, Turkey.

Hüseyin Can, Sedef Erkunt Alak, Ahmet Efe Köseoğlu, Umut Şahar, Berna Bostanbaş, Serdar Baydarlı, Mert Döşkaya, Cemal Ün

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Hüseyin CanFaculty of Science Department of Biology Molecular Biology Section, Ege University, Bornova, 35040, İzmir, Turkey.
Sedef Erkunt AlakFaculty of Science Department of Biology Molecular Biology Section, Ege University, Bornova, 35040, İzmir, Turkey.
Ahmet Efe KöseoğluFaculty of Science Department of Biology Molecular Biology Section, Ege University, Bornova, 35040, İzmir, Turkey.
Umut ŞaharFaculty of Science Department of Biology Molecular Biology Section, Ege University, Bornova, 35040, İzmir, Turkey.
Berna BostanbaşDepartment of Veterinary Affairs, Municipality of Narlıdere, İzmir, Turkey.
Serdar BaydarlıDepartment of Veterinary Affairs, Municipality of Narlıdere, İzmir, Turkey.
Mert DöşkayaFaculty of Medicine, Department of Parasitology, Ege University, Bornova, İzmir, Turkey.
Cemal ÜnFaculty of Science Department of Biology Molecular Biology Section, Ege University, Bornova, 35040, İzmir, Turkey. cemaluen@gmail.com.
Ege University · TR

Funding

TUBİTAK 218Z105
6 · The paper itself

Abstract

backgroundCytidine monophospho-n-acetylneuraminic acid hydroxylase (CMAH) gene associated with blood groups in cats encodes CMAH enzyme that converts Neu5Ac to Neu5Gc. Although variations in CMAH gene of pedigree cats have been revealed, the presence/lack of them in non-pedigree stray cats is unknown. Therefore, the present study aimed to investigate the variations in CMAH gene and the quantity of Neu5Ac and Neu5Gc on erythrocytes of non-pedigree stray cats (n:12) living in İzmir, Turkey. Also, the frequency of blood types was determined in 76 stray cats including 12 cats that were used for CMAH and Neu5A/Neu5Gc analysis.

resultsIn total, 14 SNPs were detected in 5'UTR as well as in exon 2, 4, 9, 10, 11 and 12 of CMAH gene. Among these SNPs, -495 C > T in 5'UTR was detected for the first time as heterozygous in type A and AB cats, and homozygous and heterozygous in type B cats. The remaining 13 that have been detected in previous studies were also found as homozygous or heterozygous. Both Neu5Gc and Neu5Ac were detected in type A and AB cats. In type B cats, only Neu5Ac was detected. Among two type AB cats, the level of Neu5Ac was found higher in cat carrying heterozygous form (T/C) of 1392T > C. The prevalence of type B cats (67.1 %) was higher than others.

conclusionsThe presence of a new SNP as well as previous SNPs indicates that more variations can be found in stray cats with a more comprehensive study in the future. Also, the high prevalence of type B cats demonstrates the possible risk of neonatal isoerythrolysis among stray cats living in İzmir, Turkey.

Indexed as

Blood Group AntigensCytidineAnimalsCatsMixed Function OxygenasesTurkeyBlood Group AntigensCMPacetylneuraminate monooxygenaseCytidineMixed Function OxygenasesBlood typingCMAH geneStray catsTurkey

Identifiers

PMID33874895
PMCPMC8054402
OpenAlexW3156960133

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.