Evidence map›Paper›PMID 33873727›Full record

ArticleThe New phytologist2004

Common gene expression in Medicago truncatula roots in response to Pseudomonas fluorescens colonization, mycorrhiza development and nodulation.

L Sanchez, S Weidmann, L Brechenmacher, M Batoux, D Van Tuinen, P Lemanceau, S Gianinazzi, V Gianinazzi-Pearson

Abstract read
PubMed Publisher
In one paragraph

Article in The New phytologist, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

L SanchezUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
S WeidmannUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
L BrechenmacherUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
M BatouxUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
D Van TuinenUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
P LemanceauUMR 1229 INRA-U, Bourgogne Microbiologie et Géochimie du Sol, BP 86510, F-21065 Dijon cedex, France.
S GianinazziUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
V Gianinazzi-PearsonUMR INRA 1088/CNRS 5184/U. Bourgogne Plante-Microbe-Environnement, INRA-CMSE, BP 86510, F-21065 Dijon cedex, France.
Institut Agro Dijon · FRCentre National de la Recherche Scientifique · FRCentre de Microbiologie du Sol et de l'Environnement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

•  Beneficial rhizosphere microorganisms may share similar molecular steps during root colonization. To test this hypothesis, we compared Medicago truncatula Gaertn. gene expression in roots colonized, or not colonized, by Glomus mosseae BEG12, Pseudomonas fluorescens C7R12 or Sinorhizobium meliloti 2011. •  Pseudomonas fluorescens C7R12 formed colonies on the surface of M. truncatula roots and colonized root tissues intercellularly and intracellularly in a way similar to that previously described for other plants. •  Semiquantitative reverse transcriptase polymerase chain reaction of a set of 12 mycorrhiza upregulated M. truncatula genes revealed different expression profiles in roots 3 weeks after inoculation with P. fluorescens or S. meliloti. Pseudomonas fluorescens colonization activated seven of the plant genes while nodulated root systems showed increased expression in only three genes and five appeared to be downregulated. •  This first report of similar gene induction by a fluorescent pseudomonad and a mycorrhizal fungus in roots supports the hypothesis that some plant cell programmes may be shared during root colonization by these beneficial microorganisms. Less similarity existed in expression of the gene set with nodulation by S. meliloti.

Indexed as

gene expressionGlomus mosseaeMedicago truncatulaPseudomonas fluorescensroot colonizationSinorhizobium meliloti

Identifiers

PMID33873727
OpenAlexW2113716272

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.