Evidence map›Paper›PMID 33872496›Full record

ArticleJournal of the American Society for Mass Spectrometry2021

Flash Oxidation (FOX) System: A Novel Laser-Free Fast Photochemical Oxidation Protein Footprinting Platform.

Joshua S Sharp, Emily E Chea, Sandeep K Misra, Ron Orlando, Marla Popov, Robert W Egan, David Holman, Scot R Weinberger

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 41 citations in OpenAlex.

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  12. Dimethylthiourea as a Quencher in Hydroxyl Radical Protein Footprinting Experiments.Journal of the American Society for Mass Spectrometry · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Joshua S SharpGenNext Technologies, Inc., Half Moon Bay, California 94019, United States.ORCID http://orcid.org/0000-0002-0115-0276
Emily E CheaGenNext Technologies, Inc., Half Moon Bay, California 94019, United States.
Sandeep K MisraDepartment of BioMolecular Sciences, School of Pharmacy, University of Mississippi, University, Mississippi 38677, United States.ORCID http://orcid.org/0000-0001-9165-3987
Ron OrlandoGenNext Technologies, Inc., Half Moon Bay, California 94019, United States.
Marla PopovGlycoScientific, Athens, Georgia 30602, United States.
Robert W EganGenNext Technologies, Inc., Half Moon Bay, California 94019, United States.
David HolmanGenNext Technologies, Inc., Half Moon Bay, California 94019, United States.
Scot R WeinbergerGenNext Technologies, Inc., Half Moon Bay, California 94019, United States.
University of Mississippi · USGlycoScientific (United States) · USUniversity of Georgia · US

Funding

Development of Isotopically Labeled Glycoproteins for use as Internal StandardsR42GM113666 · NIGMS · GLYCOSCIENTIFIC, LLC · PI ORLANDO, RON · 2020 to 2021
$697k
Tailoring the Hydroxyl Radical Footprinting Approach to Provide a Solution for the Higher Order Structural Analytical Needs of the Biopharmaceutical IndustryR43GM125420 · NIGMS · GENNEXT TECHNOLOGIES, INC. · PI WEINBERGER, SCOT RANDY · 2017 to 2017
$225k
FoxWare™, An Advanced Data Analysis Package for Hydroxyl Radical Foot-Printing Higher Order Structural AnalysisR43GM126617 · NIGMS · GENNEXT TECHNOLOGIES, INC. · PI WEINBERGER, SCOT RANDY · 2018 to 2018
$224k
NIGMS NIH HHS R42 GM113666NIGMS NIH HHS R43 GM125420NIGMS NIH HHS R43 GM126617
6 · The paper itself

Abstract

Hydroxyl radical protein footprinting (HRPF) is a powerful and flexible technique for probing changes in protein topography. With the development of the fast photochemical oxidation of proteins (FPOP), it became possible for researchers to perform HRPF in their laboratory on a very short time scale. While FPOP has grown significantly in popularity since its inception, adoption remains limited due to technical and safety issues involved in the operation of a hazardous Class IV UV laser and irreproducibility often caused by improper laser operation and/or differential radical scavenging by various sample components. Here, we present a new integrated FOX (Flash OXidation) Protein Footprinting System. This platform delivers sample

Indexed as

Chromatography, LiquidEpitopesEquipment DesignHEK293 CellsHumansOxidation-ReductionProtein ConformationProtein FootprintingTandem Mass SpectrometryTumor Necrosis Factor-alphaEpitopesTumor Necrosis Factor-alpha

Identifiers

PMID33872496
PMCPMC8812269
OpenAlexW3154727677

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.