Evidence map›Paper›PMID 33870089›Full record

ArticleEpigenetics insights2021

DNA Methylation at Birth is Associated with Childhood Serum Immunoglobulin E Levels.

Luhang Han, Akhilesh Kaushal, Hongmei Zhang, Latha Kadalayil, Jiasong Duan, John W Holloway, Wilfried Karmaus, Pratik Banerjee, Shih-Fen Tsai, Hui-Ju Wen and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Epigenetics insights, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Luhang HanDepartment of Mathematical Sciences, University of Memphis, Memphis, TN, USA.ORCID https://orcid.org/0000-0001-8617-4172
Akhilesh KaushalSchool of Medicine, Emory University, Atlanta, GA, USA.ORCID https://orcid.org/0000-0002-5137-0461
Hongmei ZhangDivision of Epidemiology, Biostatistics, and Environmental Health, University of Memphis, Memphis, TN, USA.ORCID https://orcid.org/0000-0003-3557-0364
Latha KadalayilHuman Development and Health, Faculty of Medicine, University of Southampton, Southampton, UK.
Jiasong DuanDivision of Epidemiology, Biostatistics, and Environmental Health, University of Memphis, Memphis, TN, USA.
John W HollowayHuman Development and Health, Faculty of Medicine, University of Southampton, Southampton, UK.
Wilfried KarmausDivision of Epidemiology, Biostatistics, and Environmental Health, University of Memphis, Memphis, TN, USA.
Pratik BanerjeeDepartment of Food Science and Human Nutrition, University of Illinois, Urbana, IL, USA.
Shih-Fen TsaiDivision of Environmental Health and Occupational Medicine, National Health Research Institutes, Miaoli.
Hui-Ju WenDivision of Environmental Health and Occupational Medicine, National Health Research Institutes, Miaoli.
Syed Hasan ArshadClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK.
Shu-Li WangDivision of Environmental Health and Occupational Medicine, National Health Research Institutes, Miaoli.
University of Memphis · USNational Health Research Institutes · TWUniversity of Southampton · GBEmory University · USSt Mary's Hospital · GBUniversity of Illinois Urbana-Champaign · US

Funding

Does epigenetic methylation explain the gender-switch in adolescent asthma?R01AI121226 · NIAID · UNIVERSITY OF MEMPHIS · PI HOLLOWAY, JOHN W, ZHANG, HONGMEI · 2016 to 2020
$3.2M
Transgenerational epigenetic inheritance of allergy in a multigenerational cohortR01AI091905 · NIAID · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI KARMAUS, WILFRIED JJ · 2011 to 2015
$2.7M
NIAID NIH HHS R01 AI091905NIAID NIH HHS R01 AI121226
6 · The paper itself

Abstract

Immunoglobulin E (IgE) is known to play an important role in allergic diseases. Epigenetic traits acquired due to modification of deoxyribonucleic acid (DNA) methylation (DNAm) in early life may have phenotypic consequences through their role in transcriptional regulation with relevance to the developmental origins of diseases including allergy. However, epigenome-scale studies on the longitudinal association of cord blood DNAm with IgE over time are lacking. Our study aimed to examine the association of DNAm at birth with childhood serum IgE levels during early life. Genome-scale DNAm and total serum IgE measured at birth, 5, 8, and 11 years of children in the Taiwan Maternal and Infant Cohort Study were included in the study in the discovery stage. Linear mixed models were implemented to assess the association between cord blood DNAm at ~310K 5'-cytosine-phosphate-guanine-3' (CpG) sites with repeated IgE measurements, adjusting for cord blood IgE. Identified statistically significant CpGs (at a false discovery rate, FDR, of 0.05) were further tested in an independent replication cohort, the Isle of Wight (IoW) birth cohort. We mapped replicated CpGs to genes and conducted gene ontology analysis using ToppFun to identify significantly enriched pathways and biological processes of the genes. Cord blood DNAm of 273 CpG sites were significantly (FDR = 0.05) associated with IgE levels longitudinally. Among the identified CpGs available in both cohorts (184 CpGs), 92 CpGs (50%) were replicated in the IoW in terms of consistency in direction of associations between DNA methylation and IgE levels later in life, and 16 of the 92 CpGs showed statistically significant associations (

Indexed as

childhoodcord bloodDNA methylationepigeneticImmunoglobulin EIsle of Wight cohortlongitudinalTaiwan cohort

Identifiers

PMID33870089
PMCPMC8024453
OpenAlexW3149000182

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.