Evidence map›Paper›PMID 33862154›Full record

ArticleGastroenterologia y hepatologia2021

High prevalence of SARS-CoV-2 infection in patients scheduled for digestive endoscopy after the peak of the first wave of the pandemic.

Javier Pamplona, Rubén Solano, Manel Ramírez, Rosa Durandez, Fatimetu Mohamed, Laura Pardo, Miriam Sàbat

Abstract read
In one paragraph

Article in Gastroenterologia y hepatologia, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Pediatric Endoscopy During COVID-19 Times.Frontiers in pediatrics · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Javier PamplonaServicio Digestivo ICS-Intitut d'Assistència Sanitària. Hospital Santa Caterina. Salt. Girona.
Rubén SolanoAgència de Salut Pública de Catalunya. Generalitat de Catalunya. Electronic address: rsolanosilveira@gmail.com.
Manel RamírezLaboratori Clínic Territorial de Girona ICS Girona. Generalitat de Catalunya.
Rosa DurandezServicio Digestivo ICS-Intitut d'Assistència Sanitària. Hospital Santa Caterina. Salt. Girona.
Fatimetu MohamedServicio Digestivo ICS-Intitut d'Assistència Sanitària. Hospital Santa Caterina. Salt. Girona.
Laura PardoServicio Digestivo ICS-Intitut d'Assistència Sanitària. Hospital Santa Caterina. Salt. Girona.
Miriam SàbatServicio Digestivo ICS-Intitut d'Assistència Sanitària. Hospital Santa Caterina. Salt. Girona.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Healthcare professionals in endoscopy units have a possible risk of SARS-CoV-2 infection by different routes: inhalation of airborne droplets, aerosols, conjunctival contact and faecal-oral transmission.

objectiveTo describe the detection of SARS-CoV-2 in a series of patients scheduled for digestive endoscopy at the Hospital Santa Caterina. Salt. (Girona).

methodsDescriptive study of a series of cases of patients scheduled for endoscopy during the month of May 2020, when endoscopic activity was resumed after the peak of the pandemic, following SCD, SEED, AEG and ESGE recommendations. We examined nasopharyngeal samples 48-72 hours before the appointment, by RT-PCR, in all patients. RNA extraction was performed using the kits: Qiagen®-adapted, BiosSprint®96-DNA-Blood-Kit (384). For amplification-detection of SARS-CoV-2, methods recommended by the WHO and the CDC were followed.

results110 asymptomatic patients without close contact with a positive case in the previous 14 days were scheduled; 105 (96.4%) were negative and five (4.5%) were positive. Two patients developed respiratory symptoms after diagnosis (presymptomatic) and three remained asymptomatic. Allfive5 patients were autochthonous cases with no history of travel or residence in another city or country associated with high prevalence of infection. Four cases were women aged 60-81 years. The N gene was detected in all cases.

conclusionsA high prevalence of SARS-CoV-2 infection was detected in patients scheduled for digestive endoscopy. Given the risk of transmission to professionals, we consider it advisable to perform SARS-CoV-2 RT-PCR 48-72 hours before the examination in situations of high incidence in the population.

Indexed as

PandemicsAgedAged, 80 and overCOVID-19COVID-19 Nucleic Acid TestingEndoscopy, Digestive SystemFemaleHumansInfectious Disease Transmission, Patient-to-ProfessionalMaleMiddle AgedPrevalenceSARS-CoV-2SpainEndoscopiaEndoscopySARS-CoV-2

Identifiers

PMID33862154
PMCPMC8056966

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.