Evidence map›Paper›PMID 33860765›Full record

ArticleeLife2021

Live-cell single-molecule tracking highlights requirements for stable Smc5/6 chromatin association in vivo.

Thomas J Etheridge, Desiree Villahermosa, Eduard Campillo-Funollet, Alex David Herbert, Anja Irmisch, Adam T Watson, Hung Q Dang, Mark A Osborne, Antony W Oliver, Antony M Carr and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. International journal of molecular sciences · 2023
    Article
  9. Article
  10. Review
  11. DNA segment capture by Smc5/6 holocomplexes.Nature structural & molecular biology · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Smc5/6 silences episomal transcription by a three-step function.Nature structural & molecular biology · 2022
    Article
  18. Smc5/6 Complex Promotes Rad3Molecular and cellular biology · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Thomas J EtheridgeGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0001-8144-6917
Desiree VillahermosaGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.
Eduard Campillo-FunolletGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0001-7021-1610
Alex David HerbertGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0002-9843-9980
Anja IrmischGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.
Adam T WatsonGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.
Hung Q DangGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0002-1226-0235
Mark A OsborneChemistry Department, School of Life Sciences, University of Sussex, Falmer, United Kingdom.
Antony W OliverGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0002-2912-8273
Antony M CarrGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0002-2028-2389
Johanne M MurrayGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, United Kingdom.ORCID 0000-0001-9225-6289
University of Sussex · GB

Funding

Medical Research Council G1001668Medical Research Council MR/P018955/1Wellcome TrustWellcome Trust 110047/Z/15/Z
6 · The paper itself

Abstract

The essential Smc5/6 complex is required in response to replication stress and is best known for ensuring the fidelity of homologous recombination. Using single-molecule tracking in live fission yeast to investigate Smc5/6 chromatin association, we show that Smc5/6 is chromatin associated in unchallenged cells and this depends on the non-SMC protein Nse6. We define a minimum of two Nse6-dependent sub-pathways, one of which requires the BRCT-domain protein Brc1. Using defined mutants in genes encoding the core Smc5/6 complex subunits, we show that the Nse3 double-stranded DNA binding activity and the arginine fingers of the two Smc5/6 ATPase binding sites are critical for chromatin association. Interestingly, disrupting the single-stranded DNA (ssDNA) binding activity at the hinge region does not prevent chromatin association but leads to elevated levels of gross chromosomal rearrangements during replication restart. This is consistent with a downstream function for ssDNA binding in regulating homologous recombination.

Indexed as

Single Molecule ImagingCell Cycle ProteinsChromatinSchizosaccharomycesSchizosaccharomyces pombe ProteinsCell Cycle ProteinsChromatinSchizosaccharomyces pombe ProteinsSmc5 protein, S pombesmc6 protein, S pombechromosomesDNA repairgene expressiongeneticsgenomicssingle-molecule microscopySMC proteinsS. pombe

Identifiers

PMID33860765
PMCPMC8075580
OpenAlexW3036931053

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.