Evidence map›Paper›PMID 33857265›Full record

ArticlePLoS pathogens2021

Highly efficient CRISPR-Cas9-mediated gene knockout in primary human B cells for functional genetic studies of Epstein-Barr virus infection.

Ezgi Akidil, Manuel Albanese, Alexander Buschle, Adrian Ruhle, Dagmar Pich, Oliver T Keppler, Wolfgang Hammerschmidt

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

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  7. Sp140L functions as a herpesvirus restriction factor suppressing viral transcription and activating interferon-stimulated genes.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ezgi AkidilResearch Unit Gene Vectors, Helmholtz Zentrum München, German Research Center for Environmental Health, Munich, Germany.ORCID 0000-0001-6873-1916
Manuel AlbaneseResearch Unit Gene Vectors, Helmholtz Zentrum München, German Research Center for Environmental Health, Munich, Germany.ORCID 0000-0002-4614-7599
Alexander BuschleResearch Unit Gene Vectors, Helmholtz Zentrum München, German Research Center for Environmental Health, Munich, Germany.ORCID 0000-0001-6126-514X
Adrian RuhleGerman Center for Infection Research (DZIF), Partner site Munich, Munich, Germany.ORCID 0000-0002-8132-9814
Dagmar PichResearch Unit Gene Vectors, Helmholtz Zentrum München, German Research Center for Environmental Health, Munich, Germany.
Oliver T KepplerGerman Center for Infection Research (DZIF), Partner site Munich, Munich, Germany.ORCID 0000-0002-1384-8946
Wolfgang HammerschmidtResearch Unit Gene Vectors, Helmholtz Zentrum München, German Research Center for Environmental Health, Munich, Germany.ORCID 0000-0002-4659-0427
Helmholtz Zentrum München · DEGerman Center for Infection Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene editing is now routine in all prokaryotic and metazoan cells but has not received much attention in immune cells when the CRISPR-Cas9 technology was introduced in the field of mammalian cell biology less than ten years ago. This versatile technology has been successfully adapted for gene modifications in human myeloid cells and T cells, among others, but applications to human primary B cells have been scarce and limited to activated B cells. This limitation has precluded conclusive studies into cell activation, differentiation or cell cycle control in this cell type. We report on highly efficient, simple and rapid genome engineering in primary resting human B cells using nucleofection of Cas9 ribonucleoprotein complexes, followed by EBV infection or culture on CD40 ligand feeder cells to drive in vitro B cell survival. We provide proof-of-principle of gene editing in quiescent human B cells using two model genes: CD46 and CDKN2A. The latter encodes the cell cycle regulator p16INK4a which is an important target of Epstein-Barr virus (EBV). Infection of B cells carrying a knockout of CDKN2A with wildtype and EBNA3 oncoprotein mutant strains of EBV allowed us to conclude that EBNA3C controls CDKN2A, the only barrier to B cell proliferation in EBV infected cells. Together, this approach enables efficient targeting of specific gene loci in quiescent human B cells supporting basic research as well as immunotherapeutic strategies.

Indexed as

Gene EditingB-LymphocytesCRISPR-Cas SystemsEpstein-Barr Virus InfectionsEpstein-Barr Virus Nuclear AntigensGene Knockout TechniquesHerpesvirus 4, HumanHumansLymphocyte ActivationViral ProteinsVirus LatencyEpstein-Barr Virus Nuclear AntigensViral Proteins

Identifiers

PMID33857265
PMCPMC8078793
OpenAlexW3155357417

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.