Evidence map›Paper›PMID 33855118›Full record

ArticleBio-protocol2021

Retention Using Selective Hooks (RUSH) Cargo Sorting Assay for Live-cell Vesicle Tracking in the Secretory Pathway Using HeLa Cells.

Mehrshad Pakdel, Natalia Pacheco-Fernandez, Julia von Blume

Abstract read
In one paragraph

Article in Bio-protocol, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mehrshad PakdelDepartment of Molecular Medicine, Max-Planck Institute of Biochemistry, Martinsried, Germany.
Natalia Pacheco-FernandezDepartment of Molecular Medicine, Max-Planck Institute of Biochemistry, Martinsried, Germany.
Julia von BlumeDepartment of Cell Biology, Yale University, New Haven (CN), USA.

Funding

Mechanism of secretory cargo sorting at the trans-Golgi Network (TGN)R35GM149293 · NIGMS · YALE UNIVERSITY · PI Julia von Blume · 2023 to 2026
$1.6M
Mechanism of secretory cargo export from the TGNR01GM134083 · NIGMS · YALE UNIVERSITY · PI VON BLUME, JULIA · 2019 to 2022
$1.5M
NIGMS NIH HHS R01 GM134083NIGMS NIH HHS R35 GM149293
6 · The paper itself

Abstract

More than 30% of the total amount of proteins synthesized in mammalian cells follow the secretory pathway in order to mature and be properly sorted to their final destinations. Among several methodologies that describe live-cell monitoring of vesicles, the Retention Using Selective Hooks (RUSH) system is a powerful one that allows to visualize cargo trafficking under physiological conditions. The present protocol describes a method to use the RUSH system in live-cell microscopy and a subsequent quantitative analysis of cargo vesicles to dissect protein trafficking. In brief, HeLa cells are transiently transfected with an MMP2-RUSH construct and vesicle trafficking is evaluated by wide-field microscopy, recording videos in 1-min time frames for 45 min. We also present a quantitative approach that can be used to identify kinetics of uncharacterized protein cargo, as well as to evaluate with more detail processes such as ER-to-Golgi vesicle trafficking.

Indexed as

Cargo sortingConfocal microscopyProtein traffickingRUSHVesicle trafficking

Identifiers

PMID33855118
PMCPMC8032492

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.