Evidence map›Paper›PMID 33854127›Full record

ArticleScientific reports2021

Land use in urban areas impacts the composition of soil bacterial communities involved in nitrogen cycling. A case study from Lefkosia (Nicosia) Cyprus.

Coralea Stephanou, Michalis Omirou, Laurent Philippot, Andreas M Zissimos, Irene C Christoforou, Slave Trajanoski, Anastasis Oulas, Ioannis M Ioannides

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Coralea StephanouDepartment of Agrobiotechnology, Agricultural Research Institute, Nicosia, Cyprus.
Michalis OmirouDepartment of Agrobiotechnology, Agricultural Research Institute, Nicosia, Cyprus. michalis.omirou@ari.gov.cy.
Laurent PhilippotUniversité Bourgogne Franche-Comté, INRA, AgroSup Dijon, Agroécologie, 21000, Dijon, France.
Andreas M ZissimosGeological Survey Department, Ministry of Agriculture, Rural Development and Environment, Nicosia, Cyprus.
Irene C ChristoforouGeological Survey Department, Ministry of Agriculture, Rural Development and Environment, Nicosia, Cyprus.
Slave TrajanoskiCenter for Medical Research, Medical University of Graz, Graz, Austria.
Anastasis OulasCyprus Institute of Neurology and Genetics, Bioinformatics Group, Engomi, Cyprus.
Ioannis M IoannidesDepartment of Agrobiotechnology, Agricultural Research Institute, Nicosia, Cyprus.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The different types of land-use and soil lithology in urban and peri-urban areas of modern cities compose a complex mosaic of soil ecosystems. It is largely unknown how these differences result in changes in bacterial community composition and structure as well as in functional guilds involved in N cycling. To investigate the bacterial composition and the proportion of denitrifiers in agricultural, forested, schoolyard and industrial areas, 24 samples were collected from urban and peri-urban sites of Lefkosia. Bacterial diversity and the proportion of denitrifiers were assessed by NGS and qPCR, respectively. Proteobacteria, Actinobacteria, Bacteriodetes, Chloroflexi, Acidobacteria and Planctomycetes were identified as the most dominant phyla across all sites, while agricultural sites exhibited the highest bacterial diversity. Heavy metals such as Co, Pb, V and Al were identified as key factors shaping bacterial composition in industrial and schoolyard sites, while the bacterial assemblages in agricultural and forested sites were associated with Ca. Variance partitioning analysis showed that 10.2% of the bacterial community variation was explained by land use management, 5.1% by chemical elements due to soil lithology, and 1.4% by sampling location. The proportion of denitrifiers varied with land use management. In industrial and schoolyard sites, the abundance of the nosZII bacterial community increased while nirK abundance declined. Our data showed that land use and lithology have a moderate impact on the bacterial assemblages in urban and peri-urban areas of Lefkosia. As the nosZII bacterial community is important to the N

Indexed as

AgricultureBacteriaCyprusDNA, BacterialDNA, RibosomalHigh-Throughput Nucleotide SequencingMetals, HeavyNitrogen CyclePhylogenyRNA, Ribosomal, 16SSequence Analysis, DNASoilSoil MicrobiologyUrban RenewalDNA, BacterialDNA, RibosomalMetals, HeavyRNA, Ribosomal, 16SSoil

Identifiers

PMID33854127
PMCPMC8047022

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.