Evidence map›Paper›PMID 33854082›Full record

ArticleScientific reports2021

Genetic changes are introduced by repeated exposure of Salmonella spiked in low water activity and high fat matrix to heat.

Leen Baert, Johan Gimonet, Caroline Barretto, Coralie Fournier, Balamurugan Jagadeesan

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. mBio · 2024
    Article
  3. Review
  4. Changes in the genomes and methylomes of threeFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Leen BaertNestlé Research, Vers-Chez-les-Blanc 26, 1000, Lausanne, Switzerland. Leen.Baert@rdls.nestle.com.
Johan GimonetNestlé Research, Vers-Chez-les-Blanc 26, 1000, Lausanne, Switzerland.
Caroline BarrettoNestlé Research, Vers-Chez-les-Blanc 26, 1000, Lausanne, Switzerland.
Coralie FournierNestlé Research, EPFL Innovation Park, 1015, Lausanne, Switzerland.
Balamurugan JagadeesanNestlé Research, Vers-Chez-les-Blanc 26, 1000, Lausanne, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

WGS is used to define if isolates are "in" or "out" of an outbreak and/or microbial root cause investigation. No threshold of genetic differences is fixed and the conclusions on similarity between isolates are mainly based on the knowledge generated from previous outbreak investigations and reported mutation rates. Mutation rates in Salmonella when exposed to food processing conditions are lacking. Thus, in this study, the ability of heat and dry stress to cause genetic changes in two Salmonella serotypes frequently isolated from low moisture foods was investigated. S. enterica serovars S. Agona ATCC 51,957 and S. Mbandaka NCTC 7892 (ATCC 51,958) were repeatedly exposed to heat (90 °C for 5 min) in a low water activity and high fat matrix. No increased fitness of the strains was observed after 10 repeated heat treatments. However, genetic changes were introduced and the number of genetic differences increased with every heat treatment cycle. The genetic changes appeared randomly in the genome and were responsible for a population of diverse isolates with 0 to 28 allelic differences (0 to 38 SNPs) between them. This knowledge is key to interpret WGS results for source tracking investigations as part of a root cause analysis in a contamination event as isolates are exposed to stress conditions.

Indexed as

MutationFood HandlingFood MicrobiologyGenetic FitnessGenome, BacterialHot TemperatureSalmonellaSerogroupStress, PhysiologicalWaterWhole Genome SequencingWater

Identifiers

PMID33854082
PMCPMC8046991

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.