Evidence map›Paper›PMID 33852834›Full record

ArticleCell reports2021

TDP-43 prevents endogenous RNAs from triggering a lethal RIG-I-dependent interferon response.

William Dunker, Xiang Ye, Yang Zhao, Lanxi Liu, Antiana Richardson, John Karijolich

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 55 citations in OpenAlex.

  1. Trial
  2. Distinct single-nucleus RNA-seq changes among non-neuronal cells in ADNC, LATE-NC, and mixed pathologies.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
  3. YBX1 regulates RNA polymerase III transcripts to prevent inflammation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. TDP-43: [GU]-ardian of the transcriptome.Molecular neurodegeneration · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
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  12. TDP-43: unveiling the hidden key to cellular fate decisions.Cell communication and signaling : CCS · 2025
    Review
  13. Review
  14. Article
  15. Article
  16. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

William DunkerDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232-2363, USA.
Xiang YeDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232-2363, USA.
Yang ZhaoDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232-2363, USA.
Lanxi LiuDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232-2363, USA.
Antiana RichardsonDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232-2363, USA.
John KarijolichDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232-2363, USA; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232-2363, USA; Vanderbilt-Ingram Cancer Center, Nashville, TN 37232-2363, USA; Vanderbilt Institute for Infection, Immunology and Inflammation, Nashville, TN 37232-2363, USA; Vanderbilt Center for Immunobiology, Nashville, TN 37232-2363, USA. Electronic address: john.karijolich@vanderbilt.edu.
Vanderbilt University Medical Center · USVanderbilt University · US

Funding

Cell Intrinsic Immune Control of KSHVR01AI141448 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KARIJOLICH, JOHN · 2020 to 2024
$2.1M
(PQ#2) Transposable element-mediated gene regulation in KSHV-associated cancerR01CA250051 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KARIJOLICH, JOHN · 2020 to 2024
$2.1M
NCI NIH HHS R01 CA250051NIAID NIH HHS R01 AI141448
6 · The paper itself

Abstract

RIG-I-like receptors (RLRs) are involved in the discrimination of self versus non-self via the recognition of double-stranded RNA (dsRNA). Emerging evidence suggests that immunostimulatory dsRNAs are ubiquitously expressed but are disrupted or sequestered by cellular RNA binding proteins (RBPs). TDP-43 is an RBP associated with multiple neurological disorders and is essential for cell viability. Here, we demonstrate that TDP-43 regulates the accumulation of immunostimulatory dsRNA. The immunostimulatory RNA is identified as RNA polymerase III transcripts, including 7SL and Alu retrotransposons, and we demonstrate that the RNA-binding activity of TDP-43 is required to prevent immune stimulation. The dsRNAs activate a RIG-I-dependent interferon (IFN) response, which promotes necroptosis. Genetic inactivation of the RLR-pathway rescues the interferon-mediated cell death associated with loss of TDP-43. Collectively, our study describes a role for TDP-43 in preventing the accumulation of endogenous immunostimulatory dsRNAs and uncovers an intricate relationship between the control of cellular gene expression and IFN-mediated cell death.

Indexed as

Adaptor Proteins, Signal TransducingAlu ElementsCell Line, TumorCell SurvivalCytokinesDEAD Box Protein 58DNA-Binding ProteinsEpithelial CellsGene Expression RegulationHEK293 CellsHerpesvirus 8, HumanHumansImmunizationInterferonsInterleukin-6Necroptosis7SL RNAAdaptor Proteins, Signal TransducingCytokinesDEAD Box Protein 58DNA-Binding ProteinsIFIT1 protein, humanIL6 protein, humanInterferonsInterleukin-6ISG15 protein, humanReceptors, ImmunologicRIGI protein, humanRNA-Binding ProteinsRNA, Double-StrandedRNA, MessengerRNA Polymerase IIIRNA, Small CytoplasmicRNA, ViralSignal Recognition ParticleTARDBP protein, humanTumor Necrosis Factor-alphaUbiquitinsdouble-stranded RNAgene expressionnecroptosisRIG-I-like receptorsRNA binding proteinTDP-43

Identifiers

PMID33852834
PMCPMC8109599
OpenAlexW3153755866

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.