Evidence map›Paper›PMID 33852152›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2021

Genomic analysis reveals the potential for hydrocarbon degradation of Rhodopirellula sp. MGV isolated from a polluted Brazilian mangrove.

Juliana Eschholz de Araujo, Rodrigo Gouvêa Taketani, Victor Satler Pylro, Laura Rabelo Leite, Michele de Cássia Pereira E Silva, Leandro Nascimento Lemos, Marcus Venícius de Mello Lourenço, Fernando Dini Andreote

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 18 citations in OpenAlex.

  1. Phylogenetic diversity and community structure ofFrontiers in microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Juliana Eschholz de AraujoDepartment of Soil Science, Soil Microbiology Laboratory, "Luiz de Queiroz" College of Agriculture, University of Sao Paulo-ESALQ/USP, Av Pádua Dias 11, Piracicaba, São Paulo, 13418-900, Brazil. juliana.earaujo@hotmail.com.ORCID http://orcid.org/0000-0002-3311-3701
Rodrigo Gouvêa TaketaniDepartment of Soil Science, Soil Microbiology Laboratory, "Luiz de Queiroz" College of Agriculture, University of Sao Paulo-ESALQ/USP, Av Pádua Dias 11, Piracicaba, São Paulo, 13418-900, Brazil.
Victor Satler PylroDepartment of Biology, Microbiology Sector, Federal University of Lavras, DBI-University Campus, Lavras, MG, 37200000, Brazil.
Laura Rabelo LeiteBiosystems Informatics and Genomics Group, René Rachou Research Center, Belo Horizonte, Minas Gerais, Brazil.
Michele de Cássia Pereira E SilvaDepartment of Soil Science, Soil Microbiology Laboratory, "Luiz de Queiroz" College of Agriculture, University of Sao Paulo-ESALQ/USP, Av Pádua Dias 11, Piracicaba, São Paulo, 13418-900, Brazil.
Leandro Nascimento LemosLaboratory of Cellular and Molecular Biology, Center for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil.
Marcus Venícius de Mello LourençoDepartment of Soil Science, Soil Microbiology Laboratory, "Luiz de Queiroz" College of Agriculture, University of Sao Paulo-ESALQ/USP, Av Pádua Dias 11, Piracicaba, São Paulo, 13418-900, Brazil.
Fernando Dini AndreoteDepartment of Soil Science, Soil Microbiology Laboratory, "Luiz de Queiroz" College of Agriculture, University of Sao Paulo-ESALQ/USP, Av Pádua Dias 11, Piracicaba, São Paulo, 13418-900, Brazil. fdandreo@gmail.com.
Universidade de São Paulo · BRUniversidade Federal de Lavras · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Planctomycetes are bacteria found in several environments, such as mangroves. In the coastline of the State of Sao Paulo (Brazilian Southeast), mangroves occur in different stages of environmental contamination, promoted by the proximity to the city and industrial activities. One of these mangroves (located in the city of Bertioga) is characterized by the high impact due to past petroleum and ongoing urban contamination. We isolated five bacteria affiliated to Planctomycetes from this mangrove and further subjected them to phenotypical and genetic analysis. The tolerance for salinity was demonstrated by the cultivation under distinct concentrations of NaCl. The ability of this bacterium to use diverse carbon sources was revealed by the use of 30 C-sources from a total of 31 tests. We found the isolate Rhodopirellula sp. MGV very closely affiliated to species of the genus Rhodopirellula, harboring a genome with 7.16 Mbp and 55.3% of GC. The annotation of the 77 contigs resulted in 6.284 CDS, with a remarkable occurrence of sequences associated with aromatic carbon metabolism. In conclusion, we present the isolation and characterization of a Planctomycetes from mangroves, suggesting its participation in the degradation of hydrocarbons present in the contaminated mangroves studied.

Indexed as

HydrocarbonsPlanctomycetalesWater Pollution, ChemicalBacteriaBrazilCarbonGenomicsPhylogenyWetlandsCarbonHydrocarbonsBacterial cultivationDegradation of hydrocarbonsGenome of PlanctomycetesMetabolic profilePVC superphylumRhodopirellula sp. MGV

Identifiers

PMID33852152
PMCPMC8324706
OpenAlexW3153270106

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.