Evidence map›Paper›PMID 33851876›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2021

Balancing precision versus cohort transcriptomic analysis of acute and recovery phase of viral bronchiolitis.

Ruchir Gupta, Mara L Leimanis, Marie Adams, André S Bachmann, Katie L Uhl, Caleb P Bupp, Nicholas L Hartog, Eric J Kort, Rosemary Olivero, Sarah S Comstock and 4 more

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Ruchir GuptaDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Mara L LeimanisDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Marie AdamsGenomics Core Facility, Van Andel Institute, Grand Rapids, Michigan.
André S BachmannDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Katie L UhlDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Caleb P BuppSpectrum Health Medical Genetics, Grand Rapids, Michigan.
Nicholas L HartogAllergy & Immunology, Spectrum Health, Grand Rapids, Michigan.
Eric J KortDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Rosemary OliveroDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Sarah S ComstockDepartment of Food Science and Human Nutrition, Michigan State University, East Lansing, Michigan.
Dominic J SanfilippoDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Sophia Y LuntBiochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan.ORCID 0000-0003-4522-6065
Jeremy W ProkopDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.ORCID 0000-0002-1818-9695
Surender RajasekaranDepartment of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, Michigan.
Michigan State University · USHelen DeVos Children's Hospital · USSpectrum Health · USVan Andel Institute · USCorewell Health Blodgett Hospital · US

Funding

Using a Sequence-to-Structure-to-Function Approach to Functionally Characterize Protein Coding Missense Mutations in the Human and Rat GenomesK01ES025435 · NIEHS · MICHIGAN STATE UNIVERSITY · PI PROKOP, JEREMY WILLIAM · 2014 to 2018
$489k
HHS | National Institutes of Health (NIH) K01ES025435NIEHS NIH HHS K01 ES025435
6 · The paper itself

Abstract

Viral infections affecting the lower respiratory tract place enormous burdens on hospitals. As neither vaccines nor antiviral agents exist for many viruses, understanding risk factors and outcomes in each patient using minimally invasive analysis, such as blood, can lead to improved health care delivery. A cohort of PAXgene RNA sequencing of infants admitted with moderate or severe acute bronchiolitis and respiratory syncytial virus were compared with case-control statistical analysis and cohort-based outlier mapping for precision transcriptomics. Patients with severe bronchiolitis had signatures connected to the immune system, interferon signaling, and cytokine signaling, with marked sex differences in

Indexed as

Bronchiolitis, ViralHumansMinor Histocompatibility AntigensRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsSeverity of Illness IndexTranscriptomeVirus DiseasesMinor Histocompatibility Antigensimmune systemprecision medicinerespiratory syncytial virustranscriptomicsviral bronchiolitis

Identifiers

PMID33851876
PMCPMC8285625
OpenAlexW3153448780

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.