Evidence map›Paper›PMID 33851100›Full record

ArticleiScience2021

Pan-cancer noncoding genomic analysis identifies functional

Zaoke He, Tao Wu, Shixiang Wang, Jing Zhang, Xiaoqin Sun, Ziyu Tao, Xiangyu Zhao, Huimin Li, Kai Wu, Xue-Song Liu

Open access · goldAbstract read
In one paragraph

Article in iScience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Zaoke HeSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Tao WuSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Shixiang WangSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Jing ZhangSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Xiaoqin SunSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Ziyu TaoSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Xiangyu ZhaoSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Huimin LiSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
Kai WuDepartment of Thoracic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.
Xue-Song LiuSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201203, China.
ShanghaiTech University · CNChinese Academy of Sciences · CNFirst Affiliated Hospital of Zhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noncoding DNA sequences occupy more than 98% of the human genome; however, few cancer noncoding drivers have been identified compared with cancer coding drivers, probably because cancer noncoding drivers have a distinct mutation pattern due to the distinct function of noncoding DNA. Here we performed pan-cancer whole genome mutation analysis to screen for functional noncoding mutations that influence protein factor binding. Recurrent mutations were identified in the promoter of

Indexed as

CancerCancer Systems BiologyGeneticsGenomics

Identifiers

PMID33851100
PMCPMC8024666
OpenAlexW3133780597

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.