Evidence map›Paper›PMID 33850299›Full record

ArticleLeukemia2021

Targeted gene panels identify a high frequency of pathogenic germline variants in patients diagnosed with a hematological malignancy and at least one other independent cancer.

Deepak Singhal, Christopher N Hahn, Simone Feurstein, Li Yan A Wee, Luke Moma, Monika M Kutyna, Rakchha Chhetri, Leila Eshraghi, Andreas W Schreiber, Jinghua Feng and 15 more

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 50 citations in OpenAlex.

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  16. Germline loss-of-functionHaematologica · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 6 institutions in 2 countries.

Deepak Singhal *Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia.
Christopher N Hahn *Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0001-5105-2554
Simone FeursteinSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-9996-4277
Li Yan A WeeDepartment of Haematology, Royal Adelaide Hospital, Central Adelaide Local Health Network Adelaide, Adelaide, SA, Australia.
Luke MomaSection of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-6699-5336
Monika M KutynaAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0003-2315-091X
Rakchha ChhetriAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.
Leila EshraghiDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
Andreas W SchreiberClinical and Health Sciences, University of South Australia, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0002-9081-3405
Jinghua FengClinical and Health Sciences, University of South Australia, Adelaide, SA, Australia.
Paul P-S WangAustralian Cancer Research Foundation Cancer Genomics Facility, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
Milena BabicDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
Wendy T ParkerDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
Song GaoDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.
Sarah MooreDepartment of Genetics and Molecular Pathology, Centre for Cancer Biology, SA Pathology, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0001-6957-8423
Soma DasDepartment of Human Genetics, The University of Chicago, Chicago, IL, USA.
David ThomasThe Kinghorn Cancer Centre, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Swetansu PattnaikThe Kinghorn Cancer Centre, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.
Anna L BrownAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0002-9023-0138
Richard J D'AndreaClinical and Health Sciences, University of South Australia, Adelaide, SA, Australia.
Nicola K PoplawskiAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.
Daniel ThomasAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.
Hamish S ScottAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0002-5813-631X
Lucy A Godley *Section of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL, USA. lgodley@medicine.bsd.uchicago.edu.ORCID http://orcid.org/0000-0003-1914-9158
Devendra K Hiwase *Adelaide Medical School, University of Adelaide, Adelaide, SA, Australia. devendra.hiwase@sa.gov.au.
South Australia Pathology · AURoyal Adelaide Hospital · AUUniversity of Chicago · USGarvan Institute of Medical Research · AUSouth Australian Health and Medical Research Institute · AUUniversity of South Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The majority of studies assessing the contribution of pathogenic germline variants (PGVs) to cancer predisposition have focused on patients with single cancers. We analyzed 45 known cancer predisposition genes (CPGs) in germline samples of 202 patients with hematological malignancies (HMs) plus one or more other independent cancer managed at major tertiary medical centers on two different continents. This included 120 patients with therapy-related myeloid neoplasms (t-MNs), where the HM occurred after cytotoxic treatment for a first malignancy, and 82 patients with multiple cancers in which the HM was not preceded by cytotoxic therapy (MC-HM). Using American College of Medical Genetics/Association for Molecular Pathology variant classification guidelines, 13% of patients had PGVs, most frequently identified in CHEK2 (17% of PGVs), BRCA1 (13%), DDX41 (13%), and TP53 (7%). The frequency of PGVs in MC-HM was higher than in t-MN, although not statistically significant (18 vs. 9%; p = 0.085). The frequency of PGVs in lymphoid and myeloid HM patients was similar (19 vs. 17.5%; p > 0.9). Critically, patients with PGVs in BRCA1, BRCA2 or TP53 did not satisfy current clinical phenotypic criteria for germline testing. Our data suggest that a personal history of multiple cancers, one being a HM, should trigger screening for PGVs.

Indexed as

Germ-Line MutationAdolescentAdultAgedAged, 80 and overBiomarkers, TumorBRCA1 ProteinBRCA2 ProteinFemaleFollow-Up StudiesGenetic Predisposition to DiseaseHematologic NeoplasmsHumansMaleMiddle AgedNeoplasmsBiomarkers, TumorBRCA1 ProteinBRCA1 protein, humanBRCA2 ProteinBRCA2 protein, humanTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID33850299
OpenAlexW3155752520

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.