Evidence map›Paper›PMID 33849587›Full record

ArticlePlant methods2021

A device for the controlled cooling and freezing of excised plant specimens during magnetic resonance imaging.

Camilo Villouta, Benjamin L Cox, Beth Rauch, Beth Ann A Workmaster, Kevin W Eliceiri, Amaya Atucha

Abstract read
In one paragraph

Article in Plant methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Acquisition of Freezing Tolerance inFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Camilo Villouta *Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr., Madison, WI, 53706, USA.
Benjamin L Cox *Medical Engineering Group, Morgridge Institute for Research, 330 N Orchard St, Madison, WI, 53706, USA.
Beth RauchDepartment of Medical Physics, University of Wisconsin-Madison, 1111 Highland Ave., Madison, WI, 53705, USA.
Beth Ann A WorkmasterDepartment of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr., Madison, WI, 53706, USA.
Kevin W EliceiriMedical Engineering Group, Morgridge Institute for Research, 330 N Orchard St, Madison, WI, 53706, USA.
Amaya AtuchaDepartment of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr., Madison, WI, 53706, USA. atucha@wisc.edu.ORCID http://orcid.org/0000-0002-8921-5096

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInvestigating plant mechanisms to tolerate freezing temperatures is critical to developing crops with superior cold hardiness. However, the lack of imaging methods that allow the visualization of freezing events in complex plant tissues remains a key limitation. Magnetic resonance imaging (MRI) has been successfully used to study many different plant models, including the study of in vivo changes during freezing. However, despite its benefits and past successes, the use of MRI in plant sciences remains low, likely due to limited access, high costs, and associated engineering challenges, such as keeping samples frozen for cold hardiness studies. To address this latter need, a novel device for keeping plant specimens at freezing temperatures during MRI is described.

resultsThe device consists of commercial and custom parts. All custom parts were 3D printed and made available as open source to increase accessibility to research groups who wish to reproduce or iterate on this work. Calibration tests documented that, upon temperature equilibration for a given experimental temperature, conditions between the circulating coolant bath and inside the device seated within the bore of the magnet varied by less than 0.1 °C. The device was tested on plant material by imaging buds from Vaccinium macrocarpon in a small animal MRI system, at four temperatures, 20 °C, - 7 °C, - 14 °C, and -  21 °C. Results were compared to those obtained by independent controlled freezing test (CFT) evaluations. Non-damaging freezing events in inner bud structures were detected from the imaging data collected using this device, phenomena that are undetectable using CFT.

conclusionsThe use of this novel cooling and freezing device in conjunction with MRI facilitated the detection of freezing events in intact plant tissues through the observation of the presence and absence of water in liquid state. The device represents an important addition to plant imaging tools currently available to researchers. Furthermore, its open-source and customizable design ensures that it will be accessible to a wide range of researchers and applications.

Indexed as

3D printingDormant budFreezing resistanceMRIPlant cold hardiness

Identifiers

PMID33849587
PMCPMC8045372

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.