ArticleBMC genomics2021
Comparative analysis of chloroplast genomes of cultivars and wild species of sweetpotato (Ipomoea batatas [L.] Lam).
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers.
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22 citing papers in PubMed, 44 citations in OpenAlex.
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- Comprehensive analysis of 385 chloroplast genomes unveils phylogenetic relationships and evolutionary history in cassava.BMC plant biology · 2025Article
- Comprehensive Chloroplast Genomic Insights intoPlants (Basel, Switzerland) · 2025Article
- Genetically and chemically intraspecific variations of Ficus hirta provide novel insights into its protection and utilization.BMC plant biology · 2025Article
- Plastome data provides new insights into population differentiation and evolution of Ginkgo in the Sichuan Basin of China.BMC plant biology · 2025Article
- Comparative analysis of mitochondrial genomes of Stemona tuberosa lour. reveals heterogeneity in structure, synteny, intercellular gene transfer, and RNA editing.BMC plant biology · 2025Article
- The Complete Chloroplast Genome ofGenes · 2024Article
- Comparative Chloroplast Genomes Analysis Provided Adaptive Evolution Insights inInternational journal of molecular sciences · 2024Article
- Genetic diversity of food-medicinalChinese herbal medicines · 2024Article
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- Complete chloroplast genome sequences of the ornamental plant Prunus cistena and comparative and phylogenetic analyses with its closely related species.BMC genomics · 2023Article
- Characterization and Comparative Analysis of Chloroplast Genomes of Medicinal HerbInternational journal of molecular sciences · 2023Article
- Chloroplast Pan-Genomes and Comparative Transcriptomics Reveal Genetic Variation and Temperature Adaptation in the Cucumber.International journal of molecular sciences · 2023Article
- Maternal Donor and Genetic Variation ofInternational journal of molecular sciences · 2023Article
- Insights into the phylogeny and chloroplast genome evolution of Eriocaulon (Eriocaulaceae).BMC plant biology · 2023Article
- Characterization of the Dicranostigma leptopodum chloroplast genome and comparative analysis within subfamily Papaveroideae.BMC genomics · 2022Article
- Sweet Potato (Foods (Basel, Switzerland) · 2022Review
- Phylogenomics and Genetic Diversity ofFrontiers in plant science · 2022Article
Corrections and comments
- Erratum issued
Authors and funding
9 authors at 3 institutions in 2 countries.
Funding
Abstract
backgroundSweetpotato (Ipomoea batatas [L.] Lam.) is an important food crop. However, the genetic information of the nuclear genome of this species is difficult to determine accurately because of its large genome and complex genetic background. This drawback has limited studies on the origin, evolution, genetic diversity and other relevant studies on sweetpotato.
resultsThe chloroplast genomes of 107 sweetpotato cultivars were sequenced, assembled and annotated. The resulting chloroplast genomes were comparatively analysed with the published chloroplast genomes of wild species of sweetpotato. High similarity and certain specificity were found among the chloroplast genomes of Ipomoea spp. Phylogenetic analysis could clearly distinguish wild species from cultivars. Ipomoea trifida and Ipomoea tabascana showed the closest relationship with the cultivars, and different haplotypes of ycf1 could be used to distinguish the cultivars from their wild relatives. The genetic structure was analyzed using variations in the chloroplast genome. Compared with traditional nuclear markers, the chloroplast markers designed based on the InDels on the chloroplast genome showed significant advantages.
conclusionsComparative analysis of chloroplast genomes of 107 cultivars and several wild species of sweetpotato was performed to help analyze the evolution, genetic structure and the development of chloroplast DNA markers of sweetpotato.
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