Evidence map›Paper›PMID 33848465›Full record

ArticleCell chemical biology2021

Protein acylation by saturated very long chain fatty acids and endocytosis are involved in necroptosis.

Apoorva J Pradhan, Daniel Lu, Laura R Parisi, Shichen Shen, Ilyas A Berhane, Samuel L Galster, Kiana Bynum, Viviana Monje-Galvan, Omer Gokcumen, Sherry R Chemler and 3 more

Open access · greenAbstract read
In one paragraph

Article in Cell chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 46 citations in OpenAlex.

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  15. Amino acid and protein specificity of protein fatty acylation inProceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Apoorva J PradhanDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Daniel LuDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Laura R ParisiDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Shichen ShenDepartment of Pharmaceutical Sciences, University at Buffalo, The State University of New York, Buffalo, NY 14214, USA.
Ilyas A BerhaneDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Samuel L GalsterDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Kiana BynumDepartment of Oral Biology, University at Buffalo, The State University of New York, Buffalo, NY 14214, USA.
Viviana Monje-GalvanDepartment of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Omer GokcumenDepartment of Biological Sciences, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Sherry R ChemlerDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA.
Jun QuDepartment of Pharmaceutical Sciences, University at Buffalo, The State University of New York, Buffalo, NY 14214, USA.
Jason G KayDepartment of Oral Biology, University at Buffalo, The State University of New York, Buffalo, NY 14214, USA.
G Ekin Atilla-GokcumenDepartment of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260, USA. Electronic address: ekinatil@buffalo.edu.
University at Buffalo, State University of New York · US

Funding

University of Buffalo Clinical and Translational Science Institute - Supplement SchulyerUL1TR001412 · NCATS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MURPHY, TIMOTHY F · 2015 to 2024
$33.8M
New Methods for Nitrogen Heterocycle SynthesisR01GM078383 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI CHEMLER, SHERRY R · 2006 to 2023
$5.6M
Enabling Access to Cutting-Edge Biomedical and Behavioral ScienceR25GM095459 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI DUBOCOVICH, MARGARITA L · 2012 to 2021
$4.4M
A role for immune cell plasticity in commensal survival and escalation of inflammationR01DE028307 · NIDCR · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI KAY, JASON G · 2020 to 2024
$1.9M
Spinning disk confocal microscopeS10OD025204 · OD · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI KAY, JASON G · 2019 to 2019
$488k
NCATS NIH HHS UL1 TR001412NIDCR NIH HHS R01 DE028307NIGMS NIH HHS R01 GM078383NIGMS NIH HHS R25 GM095459NIH HHS S10 OD025204
6 · The paper itself

Abstract

Necroptosis is a form of cell death characterized by receptor-interacting protein kinase activity and plasma membrane permeabilization via mixed-lineage kinase-like protein (MLKL). This permeabilization is responsible for the inflammatory properties of necroptosis. We previously showed that very long chain fatty acids (VLCFAs) are functionally involved in necroptosis, potentially through protein fatty acylation. Here, we define the scope of protein acylation by saturated VLCFAs during necroptosis. We show that MLKL and phosphoMLKL, key for membrane permeabilization, are exclusively acylated during necroptosis. Reducing the levels of VLCFAs decreases their membrane recruitment, suggesting that acylation by VLCFAs contributes to their membrane localization. Acylation of phosphoMLKL occurs downstream of phosphorylation and oligomerization and appears to be, in part, mediated by ZDHHC5 (a palmitoyl transferase). We also show that disruption of endosomal trafficking increases cell viability during necroptosis, possibly by preventing recruitment, or removal, of phosphoMLKL from the plasma membrane.

Indexed as

AcylationAcyltransferasesEndocytosisEnzyme InhibitorsFatty AcidsHT29 CellsHumansNecroptosisTumor Cells, CulturedAcyltransferasesEnzyme InhibitorsFatty AcidsZDHHC5 protein, humanendocytosislipidsnecroptosisprogrammed cell deathprotein acylationvesicular traffickingVLCFAZDHHC5

Identifiers

PMID33848465
PMCPMC8529612
OpenAlexW3156949807

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.