Evidence map›Paper›PMID 33847952›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Comparing SSB-PriA Functional and Physical Interactions in Gram-Positive and -Negative Bacteria.

Yen-Hua Huang, Cheng-Yang Huang

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Characterization of the Chimeric PriB-SSBc Protein.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yen-Hua HuangSchool of Biomedical Sciences, Chung Shan Medical University, Taichung City, Taiwan.
Cheng-Yang HuangSchool of Biomedical Sciences, Chung Shan Medical University, Taichung City, Taiwan. cyhuang@csmu.edu.tw.
Chung Shan Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single-stranded DNA (ssDNA)-binding protein (SSB) is essential for DNA metabolic processes. SSB also binds to many DNA-binding proteins that constitute the SSB interactome. The mechanism through which PriA helicase, an initiator protein in the DNA replication restart process, is stimulated by SSB in Escherichia coli (EcSSB) has been established. However, some Gram-positive bacterial SSBs such as Bacillus subtilis SsbA (a counterpart of EcSSB), Staphylococcus aureus SsbA, SsbB, and SsbC do not activate PriA helicase. Here, we describe some of the methods used in our laboratory to compare SSB-PriA functional and physical interactions in Gram-positive and -negative bacteria.

Indexed as

Bacillus subtilisBacterial ProteinsBinding SitesDNA-Binding ProteinsDNA HelicasesEscherichia coliEscherichia coli ProteinsModels, MolecularProtein BindingSequence Analysis, ProteinSpecies SpecificityStaphylococcus aureusSurface Plasmon ResonanceBacterial ProteinsDNA-Binding ProteinsDNA HelicasesEscherichia coli ProteinspriA protein, E coliSSB protein, E coliATPaseConSurfPriAProtein-protein interactionSPRSSBSsbAssDNA-binding proteinStimulation

Identifiers

PMID33847952
OpenAlexW3154685159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.