Evidence map›Paper›PMID 33847457›Full record

ArticleAmerican journal of medical genetics. Part A2021

Heterozygous variants in SPTBN1 cause intellectual disability and autism.

Jill A Rosenfeld, Rui Xiao, Mir Reza Bekheirnia, Farah Kanani, Michael J Parker, Mary K Koenig, Arie van Haeringen, Claudia Ruivenkamp, Joana Rosmaninho-Salgado, Pedro M Almeida and 12 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02450851 (Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network), which is not on this map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02450851 recruitingnot on this map

Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2015 to 2028Enrolled20,000ConditionsGenetic Disease
3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  10. The Node of Ranvier as an Interface for Axo-Glial Interactions: Perturbation of Axo-Glial Interactions in Various Neurological Disorders.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2023
    Review
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  15. Commentary:Frontiers in molecular neuroscience · 2022
    Article
  16. Frontiers in molecular neuroscience · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 4 countries.

Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0001-5664-7987
Rui XiaoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Mir Reza BekheirniaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Farah KananiSheffield Clinical Genetics Service, Sheffield Children's NHS Foundation Trust, Sheffield, UK.
Michael J ParkerSheffield Clinical Genetics Service, Sheffield Children's NHS Foundation Trust, Sheffield, UK.
Mary K KoenigDepartment of Pediatrics, University of Texas McGovern Medical School, Houston, Texas, USA.
Arie van HaeringenDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, Netherlands.
Claudia RuivenkampDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, Netherlands.
Joana Rosmaninho-SalgadoMedical Genetics Unit, Hospital Pediátrico, Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Pedro M AlmeidaMedical Genetics Unit, Hospital Pediátrico, Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Joaquim SáMedical Genetics Unit, Hospital Pediátrico, Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal.
Jorge Pinto BastoMolecular Diagnostics and Clinical Genomics, CGC Genetics, Porto, Portugal.
Emily PalenAutism & Developmental Medicine Institute, Geisinger, Danville, Pennsylvania, USA.
Kathryn F OetjensAutism & Developmental Medicine Institute, Geisinger, Danville, Pennsylvania, USA.
Lindsay C BurrageDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-5108-8861
Fan XiaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Pengfei LiuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0002-4177-709X
Christine M EngDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Undiagnosed Diseases Network
Yaping YangDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Jennifer E PoseyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-4814-6765
Brendan H LeeDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Baylor College of Medicine · USHospitais da Universidade de Coimbra · PTAutism & Developmental Medicine Institute · USLeiden University Medical Center · NLSheffield Children's NHS Foundation Trust · GBCentro de Genética Clínica · PTThe University of Texas Health Science Center · US

Funding

Pilot of New Technologies to Increase the Genomic Diagnosis of Undiagnosed Disease Network (UDN) PatientsU01HG007709 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI BACINO, CARLOS A., LEE, BRENDAN · 2014 to 2022
$14.3M
Preclinical and Clincial OutcomesP50HD103555 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI Sandesh Chakravarthy Sreenath Nagamani, David Loren Nelson · 2020 to 2026
$9.9M
NHGRI NIH HHS U01 HG007709NICHD NIH HHS P50 HD103555Wellcome TrustWellcome Trust HICF-1009-003
6 · The paper itself

Abstract

Spectrins are common components of cytoskeletons, binding to cytoskeletal elements and the plasma membrane, allowing proper localization of essential membrane proteins, signal transduction, and cellular scaffolding. Spectrins are assembled from α and β subunits, encoded by SPTA1 and SPTAN1 (α) and SPTB, SPTBN1, SPTBN2, SPTBN4, and SPTBN5 (β). Pathogenic variants in various spectrin genes are associated with erythroid cell disorders (SPTA1, SPTB) and neurologic disorders (SPTAN1, SPTBN2, and SPTBN4), but no phenotypes have been definitively associated with variants in SPTBN1 or SPTBN5. Through exome sequencing and case matching, we identified seven unrelated individuals with heterozygous SPTBN1 variants: two with de novo missense variants and five with predicted loss-of-function variants (found to be de novo in two, while one was inherited from a mother with a history of learning disabilities). Common features include global developmental delays, intellectual disability, and behavioral disturbances. Autistic features (4/6) and epilepsy (2/7) or abnormal electroencephalogram without overt seizures (1/7) were present in a subset. Identification of loss-of-function variants suggests a haploinsufficiency mechanism, but additional functional studies are required to fully elucidate disease pathogenesis. Our findings support the essential roles of SPTBN1 in human neurodevelopment and expand the knowledge of human spectrinopathy disorders.

Indexed as

AdolescentAdultAutistic DisorderCarrier ProteinsChildChild, PreschoolElectroencephalographyEpilepsyExome SequencingFemaleHaploinsufficiencyHeterozygoteHumansIntellectual DisabilityLoss of Function MutationMaleCarrier ProteinsMicrofilament ProteinsSpectrinSPTBN1 protein, humanSPTBN2 protein, humanneurodevelopmental disorderspectrinspectrinopathySPTBN1

Identifiers

PMID33847457
PMCPMC11182376
OpenAlexW3153861090

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.