Evidence map›Paper›PMID 33845403›Full record

ReviewCurrent opinion in chemical biology2021

Chemogenetic and optogenetic control of post-translational modifications through genetic code expansion.

Wenyuan Zhou, Alexander Deiters

Abstract readReview
In one paragraph

Review in Current opinion in chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
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  12. Therapeutic peptides: current applications and future directions.Signal transduction and targeted therapy · 2022
    Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Wenyuan ZhouDepartment of Chemistry, University of Pittsburgh, Pittsburgh, PA, 15260, USA.
Alexander DeitersDepartment of Chemistry, University of Pittsburgh, Pittsburgh, PA, 15260, USA. Electronic address: deiters@pitt.edu.

Funding

Principles for Designing Stimulus-Responsive EnzymesR01GM132565 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI KHARE, SAGAR D · 2019 to 2022
$1.8M
NIGMS NIH HHS R01 GM132565
6 · The paper itself

Abstract

Post-translational modifications (PTMs) of proteins extensively diversify the biological information flow from the genome to the proteome and thus have profound pathophysiological implications. Precise dissection of the regulatory networks of PTMs benefits from the ability to achieve conditional control through external optogenetic or chemogenetic triggers. Genetic code expansion provides a unique solution by allowing for site-specific installation of functionally masked unnatural amino acids (UAAs) into proteins, such as enzymes and enzyme substrates, rendering them inert until rapid activation through exposure to light or small molecules. Here, we summarize the most recent advances harnessing this methodology to study various forms of PTMs, as well as generalizable approaches to externally control nodes-of-interest in PTM networks.

Indexed as

Amino AcidsAnimalsBinding SitesGenetic CodeHumansMethylationOptogeneticsPhosphorylationProtein BindingProtein Processing, Post-TranslationalProteomeSubstrate SpecificitySumoylationUbiquitinationAmino AcidsProteomeGenetic code expansionPost-translational modificationProtein methylationProtein phosphorylationProtein SUMOylationProtein ubiquitinationUnnatural amino acid

Identifiers

PMID33845403
PMCPMC8384655

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.