Evidence map›Paper›PMID 33842487›Full record

ArticleFrontiers in cell and developmental biology2021

Comprehensive Analysis of the Prognostic Role and Mutational Characteristics of m6A-Related Genes in Lung Squamous Cell Carcinoma.

Chang Gu, Xin Shi, Wenli Qiu, Zhenyu Huang, Yan Yu, Feng Shen, Yumei Chen, Xufeng Pan

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Article in Frontiers in cell and developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

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41citing papers in PubMed
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3 · Its place in the literature

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41 citing papers in PubMed.

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  15. Roles and mechanisms of the mCell death discovery · 2022
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  18. The Prognostic Role of m6A-Related Genes in Paediatric Neuroblastoma Patients.Computational and mathematical methods in medicine · 2022
    Article
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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Chang GuDepartment of Thoracic Surgery, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, China.
Xin ShiDepartment of Cardiology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, China.
Wenli QiuDepartment of Lab Medicine, The Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, China.
Zhenyu HuangDepartment of Colorectal and Anal Surgery, Xinhua Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Yan YuSchool of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China.
Feng ShenSchool of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China.
Yumei ChenDepartment of Nuclear Medicine, Ren Ji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Xufeng PanDepartment of Thoracic Surgery, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThere have been limited treatment therapies for lung squamous cell carcinoma (LUSC). M6A-related genes may be the next therapeutic targets for LUSC. In this study, we explored the prognostic role and mutational characteristics of m6A-related genes in LUSC.

methodsLUSC gene expression data, mutational data, and corresponding clinical information were extracted from The Cancer Genome Atlas database. Differentially expressed genes (DEGs) were identified, and the mutation characteristics of LUSC patients were explored. Then, m6A-related genes were extracted and the correlations among the genes were detected. Finally, the prognostic roles of the genes were investigated and the nomogram model was developed. Besides, the protein-protein interaction (PPI) network was used to explore the potential interactions among the genes.

resultsIn total, there are 551 LUSC samples enrolled in our study, containing 502 LUSC tumor samples and 49 adjacent normal LUSC samples, respectively. There were 2970 upregulated DEGs and 1806 downregulated DEGs were further explored. IGF2BP1 and RBM15 had significant co-occurrence frequency (

conclusionWe investigated the expression patterns and mutational characteristics of LUSC patients and identified three potential independent prognostic m6A-related genes (WTAP, YTHDC1, and YTHDF1) for OS in LUSC patients.

Indexed as

lung squamous cell carcinomam6AnomogramprognosisRNA methylation

Identifiers

PMID33842487
PMCPMC8027321

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