Evidence map›Paper›PMID 33840392›Full record

ArticleBiotechnology for biofuels2021

Transcriptome analysis revealed the regulation of gibberellin and the establishment of photosynthetic system promote rapid seed germination and early growth of seedling in pearl millet.

Bingchao Wu, Min Sun, Huan Zhang, Dan Yang, Chuang Lin, Imran Khan, Xiaoshan Wang, Xinquan Zhang, Gang Nie, Guangyan Feng and 4 more

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  7. Article
  8. Rapid seedling emergence of invasiveFrontiers in plant science · 2024
    Article
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  10. Article
  11. Article
  12. Seed Germination Ecology of Semiparasitic WeedPlants (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Bingchao WuCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Min SunCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Huan ZhangCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Dan YangCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Chuang LinCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Imran KhanCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Xiaoshan WangCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Xinquan ZhangCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Gang NieCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Guangyan FengCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Yanhong YanCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Zhou LiCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Yan PengCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China.
Linkai HuangCollege of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 6111130, China. huanglinkai@sicau.edu.cn.ORCID http://orcid.org/0000-0001-6622-5841
Sichuan Agricultural University · CN

Funding

Modern Agricultural Industry System Sichuan Forage Innovation Team SCCXTD-2020-16Modern Agro-industry Technology Research System CARS-34Sichuan Province Research grant 2021YFYZ0013
6 · The paper itself

Abstract

backgroundSeed germination is the most important stage for the formation of a new plant. This process starts when the dry seed begins to absorb water and ends when the radicle protrudes. The germination rate of seed from different species varies. The rapid germination of seed from species that grow on marginal land allows seedlings to compete with surrounding species, which is also the guarantee of normal plant development and high yield. Pearl millet is an important cereal crop that is used worldwide, and it can also be used to extract bioethanol. Previous germination experiments have shown that pearl millet has a fast seed germination rate, but the molecular mechanisms behind pearl millet are unclear. Therefore, this study explored the expression patterns of genes involved in pearl millet growth from the germination of dry seed to the early growth stages.

resultsThrough the germination test and the measurement of the seedling radicle length, we found that pearl millet seed germinated after 24 h of swelling of the dry seed. Using transcriptome sequencing, we characterized the gene expression patterns of dry seed, water imbibed seed, germ and radicle, and found more differentially expressed genes (DEGs) in radicle than germ. Further analysis showed that different genome clusters function specifically at different tissues and time periods. Weighted gene co-expression network analysis (WGCNA) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that many genes that positively regulate plant growth and development are highly enriched and expressed, especially the gibberellin signaling pathway, which can promote seed germination. We speculated that the activation of these key genes promotes the germination of pearl millet seed and the growth of seedlings. To verify this, we measured the content of gibberellin and found that the gibberellin content after seed imbibition rose sharply and remained at a high level.

conclusionsIn this study, we identified the key genes that participated in the regulation of seed germination and seedling growth. The activation of key genes in these pathways may contribute to the rapid germination and growth of seed and seedlings in pearl millet. These results provided new insight into accelerating the germination rate and seedling growth of species with slow germination.

Indexed as

Hormone signal transductionPearl milletSeed germinationSeedling growthTranscriptome

Identifiers

PMID33840392
PMCPMC8040237
OpenAlexW3111662600

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.