ArticleBMC genomics2021
Identification and evolution analysis of the JAZ gene family in maize.
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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33 citing papers in PubMed, 57 citations in OpenAlex.
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- Identification, Bioinformatics, and Expression Analysis ofInternational journal of molecular sciences · 2026Article
- Genome-Wide Identification of the JAZ Family in Quinoa and the Negative Regulatory Role of CqJAZ1 in Abiotic Stress Responses.International journal of molecular sciences · 2026Article
- Pan-genome landscape of the JAZ family in pepper (Frontiers in plant science · 2026Article
- Genome-wide identification and characterization of theFrontiers in plant science · 2026Article
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- Genome-Wide Characterization of theInternational journal of molecular sciences · 2025Article
- Investigation of the Jasmonate ZIM-Domain Family RevealsBiomolecules · 2025Article
- Integrated Pan-Cancer Analysis and Experimental Verification of the Roles of Retinoid-Binding Proteins in Breast Cancer.Cancers · 2025Article
- Genome-Wide Analysis and Expression Profiling of the JAZ Gene Family in Response to Abiotic Stress in Alfalfa.International journal of molecular sciences · 2025Article
- Genome-wide insights into the nomenclature, evolution and expression of tobacco TIFY/JAZ genes.Planta · 2025Article
- Genome-Wide Analysis of theInternational journal of molecular sciences · 2025Article
- Functional Characterization of thePlants (Basel, Switzerland) · 2025Article
- Systematic Survey and Analysis Reveal Jasmonate ZIM-Domain Gene Family inPlants (Basel, Switzerland) · 2024Article
- A tip of the iceberg: genome survey indicated a complex evolutionary history of Garuga Roxb. species.BMC genomics · 2024Article
- Genome-Wide Identification, Phylogenetic, and Expression Analysis of Jasmonate ZIM-Domain Gene Family inInternational journal of molecular sciences · 2024Article
- COI1 F-box proteins regulate DELLA protein levels, growth, and photosynthetic efficiency in maize.The Plant cell · 2024Article
- Genome-wide identification of JAZ gene family members in autotetraploid cultivated alfalfa (Medicago sativa subsp. sativa) and expression analysis under salt stress.BMC genomics · 2024Article
- Jasmonate ZIM Domain Protein (Plants (Basel, Switzerland) · 2024Article
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundJasmonates (JAs) are important for plants to coordinate growth, reproduction, and defense responses. In JA signaling, jasmonate ZIM-domain (JAZ) proteins serve as master regulators at the initial stage of herbivores attacks. Although discovered in many plant species, little in-depth characterization of JAZ gene expression has been reported in the agronomically important crop, maize (Zea mays L.).
resultsIn this study 16 JAZ genes from the maize genome were identified and classified. Phylogenetic analyses were performed from maize, rice, sorghum, Brachypodium, and Arabidopsis using deduced protein sequences, total six clades were proposed and conservation was observed in each group, such as similar gene exon/intron structures. Synteny analysis across four monocots indicated these JAZ gene families had a common ancestor, and duplication events in maize genome may drive the expansion of JAZ gene family, including genome-wide duplication (GWD), transposon, and/or tandem duplication. Strong purifying selection acted on all JAZ genes except those in group 4, which were under neutral selection. Further, we cloned three paralogous JAZ gene pairs from two maize inbreds differing in JA levels and insect resistance, and gene polymorphisms were observed between two inbreds.
conclusionsHere we analyzed the composition and evolution of JAZ genes in maize with three other monocot plants. Extensive phylogenetic and synteny analysis revealed the expansion and selection fate of maize JAZ. This is the first study comparing the difference between two inbreds, and we propose genotype-specific JAZ gene expression might be present in maize plants. Since genetic redundancy in JAZ gene family hampers our understanding of their role in response to specific elicitors, we hope this research could be pertinent to elucidating the defensive responses in plants.
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