Evidence map›Paper›PMID 33837826›Full record

ArticleEuropean biophysics journal : EBJ2021

Uncertainty in protein-ligand binding constants: asymmetric confidence intervals versus standard errors.

Vaida Paketurytė, Vytautas Petrauskas, Asta Zubrienė, Olga Abian, Margarida Bastos, Wen-Yih Chen, Maria João Moreno, Georg Krainer, Vaida Linkuvienė, Arthur Sedivy and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in European biophysics journal : EBJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
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  6. Complement activation by IgG subclasses is governed by their ability to oligomerize upon antigen binding.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. PLBD: protein-ligand binding database of thermodynamic and kinetic intrinsic parameters.Database : the journal of biological databases and curation · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Cosolvent Sites-Based Discovery ofJournal of medicinal chemistry · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Vaida PaketurytėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, 10257, Vilnius, Lithuania.ORCID https://orcid.org/0000-0003-0919-7826
Vytautas PetrauskasDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, 10257, Vilnius, Lithuania.ORCID https://orcid.org/0000-0001-7983-4128
Asta ZubrienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, 10257, Vilnius, Lithuania.ORCID https://orcid.org/0000-0001-5996-1883
Olga AbianInstitute of Biocomputation and Physics of Complex Systems (BIFI), Joint Units IQFR-CSIC-BIFI, and GBsC-CSIC-BIFI, Universidad de Zaragoza, Zaragoza, Spain.ORCID https://orcid.org/0000-0001-5664-1729
Margarida BastosDepartment of Chemistry and Biochemistry, Faculty of Sciences, CIQ-UP, University of Porto, Porto, Portugal. mbastos@fc.up.pt.ORCID https://orcid.org/0000-0001-7464-3568
Wen-Yih ChenDepartment of Chemical and Materials Engineering, National Central University, Taoyüan, Taiwan.ORCID https://orcid.org/0000-0002-9930-7605
Maria João MorenoChemistry Department, Faculty of Sciences and Technology, Coimbra Chemistry Center, University of Coimbra, 3004-535, Coimbra, Portugal.ORCID https://orcid.org/0000-0003-3076-9905
Georg KrainerYusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK.ORCID https://orcid.org/0000-0002-9626-7636
Vaida LinkuvienėDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, 10257, Vilnius, Lithuania.ORCID https://orcid.org/0000-0003-2075-8145
Arthur SedivyProtein Technologies, Vienna Biocenter Core Facilities GmbH, Vienna, Austria. arthur.sedivy@vbcf.ac.at.ORCID https://orcid.org/0000-0002-5729-9790
Adrian Velazquez-CampoyInstitute of Biocomputation and Physics of Complex Systems (BIFI), Joint Units IQFR-CSIC-BIFI, and GBsC-CSIC-BIFI, Universidad de Zaragoza, Zaragoza, Spain. adrianvc@unizar.es.ORCID https://orcid.org/0000-0001-5702-4538
Mark A WilliamsDepartment of Biological Sciences, Institute for Structural and Molecular Biology, Birkbeck, University of London, London, UK. ma.williams@bbk.ac.uk.ORCID https://orcid.org/0000-0002-1645-2189
Daumantas MatulisDepartment of Biothermodynamics and Drug Design, Institute of Biotechnology, Life Sciences Center, Vilnius University, Saulėtekio 7, 10257, Vilnius, Lithuania. daumantas.matulis@bti.vu.lt.ORCID https://orcid.org/0000-0002-6178-6276

Funding

Fundação para a Ciência e Tecnologia (FCT) UID/QUI/0081/2013Lietuvos Mokslo Taryba S-LLT-20-2
6 · The paper itself

Abstract

Equilibrium binding constants (K

Indexed as

UncertaintyCalorimetryConfidence IntervalsLigandsProtein BindingThermodynamicsLigandsBinding constantConfidence intervalsDissociation constantIsothermal titration calorimetryLog-normal distributionStandard error

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.