Evidence map›Paper›PMID 33836770›Full record

ArticleMicrobial cell factories2021

Study on the mechanism of production of γ-PGA and nattokinase in Bacillus subtilis natto based on RNA-seq analysis.

Min Li, Zilong Zhang, Shenwei Li, Zhengan Tian, Xia Ma

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Process optimization of co-fermentation natto withJournal of food science and technology · 2025
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  7. Enhancement of vitamin BMicrobial cell factories · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Effects of FeMicrobial cell factories · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Min LiSchool of Perfume and Aroma Technology, Shanghai Institute of Technology, Shanghai, 201418, China.
Zilong ZhangShanghai International Travel Healthcare Center, Shanghai Customs District P. R, Shanghai, 200335, China.
Shenwei LiShanghai International Travel Healthcare Center, Shanghai Customs District P. R, Shanghai, 200335, China.
Zhengan TianShanghai International Travel Healthcare Center, Shanghai Customs District P. R, Shanghai, 200335, China. tianzhenganciq@163.com.
Xia MaSchool of Perfume and Aroma Technology, Shanghai Institute of Technology, Shanghai, 201418, China. maxia@sit.edu.cn.ORCID http://orcid.org/0000-0002-4753-9949
Shanghai Customs College · CNDairy Management · USShanghai Institute of Technology · CNShenzhen International Travel Health Care Center · CN

Funding

the National Science and Technology Major Project 2018ZX10101003-002the National Science and Technology Major Project of the Ministry of Science and Technology of China 2017ZX10103009the Open Project Program of State Key Laboratory of Dairy Biotechnology SKLDB2013-09
6 · The paper itself

Abstract

Poly-γ-glutamic acid (γ-PGA) and nattokinase (NK) are the main substances produced by Bacillus subtilis natto in solid-state fermentation and have wide application prospects. We found that our strains had higher activity of nattokinase when soybeans were used as substrate to increase the yield of γ-PGA. Commercial production of γ-PGA and nattokinase requires an understanding of the mechanism of co-production. Here, we obtained the maximum γ-PGA yield (358.5 g/kg, w/w) and highest activity of NK during fermentation and analyzed the transcriptome of Bacillus subtilis natto during co-production of γ-PGA and NK. By comparing changes in expression of genes encoding key enzymes and the metabolic pathways associated with the products in genetic engineering, the mechanism of co-production of γ-PGA and nattokinase can be summarized based on RNA-seq analysis. This study firstly provides new insights into the mechanism of co-production of γ-PGA and nattokinase by Bacillus subtilis natto and reveals potential molecular targets to promote the co-production of γ-PGA and nattokinase.

Indexed as

Bacillus subtilisCulture MediaFermentationPolyglutamic AcidSubtilisinsCulture Medianattokinasepoly(gamma-glutamic acid)Polyglutamic AcidSubtilisinsBacillus subtilis nattoCo-production mechanismNattokinaseRNA-seqγ-PGA

Identifiers

PMID33836770
PMCPMC8034199
OpenAlexW3146194570

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.