Evidence map›Paper›PMID 33836586›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Structural and functional dissection of reovirus capsid folding and assembly by the prefoldin-TRiC/CCT chaperone network.

Jonathan J Knowlton, Daniel Gestaut, Boxue Ma, Gwen Taylor, Alpay Burak Seven, Alexander Leitner, Gregory J Wilson, Sreejesh Shanker, Nathan A Yates, B V Venkataram Prasad and 4 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Protein folding by the CCT/TRiC chaperone complex.Current opinion in structural biology · 2025
    Review
  9. Protein folding: Funnel model revised.Computational and structural biotechnology journal · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. The chaperone system in cancer therapies: Hsp90.Journal of molecular histology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Jonathan J KnowltonDepartment of Pediatrics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15224.ORCID 0000-0002-1630-8734
Daniel GestautDepartment of Biology, Stanford University, Stanford, CA 94305.ORCID 0000-0003-1446-0107
Boxue MaDepartment of Bioengineering, Stanford University, Stanford, CA 94305.ORCID 0000-0002-2456-8392
Gwen TaylorDepartment of Pediatrics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15224.ORCID 0000-0002-9276-087X
Alpay Burak SevenDepartment of Structural Biology, Stanford University, Stanford, CA 94305.ORCID 0000-0001-6212-9908
Alexander LeitnerDepartment of Biology, Institute of Molecular Systems Biology, ETH Zürich, 8093 Zürich, Switzerland.ORCID 0000-0003-4126-0725
Gregory J WilsonDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232.
Sreejesh ShankerVerna and Marrs Mclean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030.
Nathan A YatesDepartment of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213.
B V Venkataram PrasadVerna and Marrs Mclean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030.
Ruedi AebersoldDepartment of Biology, Institute of Molecular Systems Biology, ETH Zürich, 8093 Zürich, Switzerland.ORCID 0000-0002-9576-3267
Wah ChiuDepartment of Bioengineering, Stanford University, Stanford, CA 94305.ORCID 0000-0002-8910-3078
Judith FrydmanDepartment of Biology, Stanford University, Stanford, CA 94305; jfrydman@stanford.edu terence.dermody@chp.edu.ORCID 0000-0003-2302-6943
Terence S DermodyDepartment of Pediatrics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15224; jfrydman@stanford.edu terence.dermody@chp.edu.ORCID 0000-0003-1853-8741
Stanford University · USUniversity of Pittsburgh · USBaylor College of Medicine · USETH Zurich · CHUniversity of Zurich · CHVanderbilt University Medical Center · US

Funding

The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007347 · NIGMS · VANDERBILT UNIVERSITY · PI WILLIAMS, CHRISTOPHER S. · 1985 to 2023
$26.3M
3 D ELECTRON MICROSCOPY OF MACROMOLECULES (5P41RR002250-27)P41GM103832 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH · 2012 to 2019
$15.1M
CELL ENTRY OF REOVIRUSR01AI032539 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI TERENCE S. DERMODY · 1998 to 2026
$12.3M
Mechanism of the Eukaryotic Chaperonin TRiC/CCTR01GM074074 · NIGMS · STANFORD UNIVERSITY · PI FRYDMAN, JUDITH · 2005 to 2024
$6.8M
Project 3: TRiC modulation of CNS pathogenesis in HD mouse modelsP01NS092525 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI THOMPSON, LESLIE MICHELS · 2016 to 2020
$6.3M
PROTEIN FOLDING IN THE EUKARYOTIC CYTOSOLR01GM056433 · NIGMS · STANFORD UNIVERSITY · PI Judith Frydman · 1997 to 2026
$5.0M
Defining the role of Host Hsp70 Subnetworks in Dengue Virus ReplicationR01AI127447 · NIAID · STANFORD UNIVERSITY · PI FRYDMAN, JUDITH · 2017 to 2021
$2.4M
Acquisition of a 300 kV Electron Microscope for Structural BiologyS10OD021600 · OD · STANFORD UNIVERSITY · PI CHIU, WAH · 2016 to 2016
$2.0M
Mechanisms of the eukaryotic chaperonin TRiC/CCT and its cochaperone PrefoldinF32GM103124 · NIGMS · STANFORD UNIVERSITY · PI GESTAUT, DAN · 2012 to 2014
$156k
Mechanisms of noncytolytic reovirus egressF30AI122563 · NIAID · VANDERBILT UNIVERSITY · PI KNOWLTON, JONATHAN JAMES · 2016 to 2019
$153k
NCATS NIH HHS UL1 TR000445NIAID NIH HHS F30 AI122563NIAID NIH HHS R01 AI032539NIAID NIH HHS R01 AI127447NIGMS NIH HHS F32 GM103124NIGMS NIH HHS P41 GM103832NIGMS NIH HHS R01 GM056433NIGMS NIH HHS R01 GM074074NIGMS NIH HHS T32 GM007347NIH HHS S10 OD021600NINDS NIH HHS P01 NS092525
6 · The paper itself

Abstract

Intracellular protein homeostasis is maintained by a network of chaperones that function to fold proteins into their native conformation. The eukaryotic TRiC chaperonin (TCP1-ring complex, also called CCT for cytosolic chaperonin containing TCP1) facilitates folding of a subset of proteins with folding constraints such as complex topologies. To better understand the mechanism of TRiC folding, we investigated the biogenesis of an obligate TRiC substrate, the reovirus σ3 capsid protein. We discovered that the σ3 protein interacts with a network of chaperones, including TRiC and prefoldin. Using a combination of cryoelectron microscopy, cross-linking mass spectrometry, and biochemical approaches, we establish functions for TRiC and prefoldin in folding σ3 and promoting its assembly into higher-order oligomers. These studies illuminate the molecular dynamics of σ3 folding and establish a biological function for TRiC in virus assembly. In addition, our findings provide structural and functional insight into the mechanism by which TRiC and prefoldin participate in the assembly of protein complexes.

Indexed as

Capsid ProteinsChaperonin Containing TCP-1Cryoelectron MicroscopyMass SpectrometryMolecular ChaperonesProtein ConformationProtein FoldingProteostasisReoviridaeCapsid ProteinsChaperonin Containing TCP-1Molecular Chaperonesprefoldinmolecular chaperonesprefoldinprotein foldingTRiCvirus assembly

Identifiers

PMID33836586
PMCPMC7980406
OpenAlexW3133966260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.