Evidence map›Paper›PMID 33835028›Full record

ArticleeLife2021

Human airway cells prevent SARS-CoV-2 multibasic cleavage site cell culture adaptation.

Mart M Lamers, Anna Z Mykytyn, Tim I Breugem, Yiquan Wang, Douglas C Wu, Samra Riesebosch, Petra B van den Doel, Debby Schipper, Theo Bestebroer, Nicholas C Wu and 1 more

Abstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed.

  1. Article
  2. Viral syncytia evolve to resist interferon.Nature communications · 2026
    Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Methods and Models for StudyingInternational journal of molecular sciences · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Organoids in virology.Npj viruses · 2024
    Review
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Mart M LamersViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0002-1431-4022
Anna Z MykytynViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0001-7188-6871
Tim I BreugemViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0002-5558-7043
Yiquan WangDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, United States.ORCID 0000-0002-1954-9808
Douglas C WuDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, United States.ORCID 0000-0001-6179-3110
Samra RieseboschViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.
Petra B van den DoelViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.
Debby SchipperViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.
Theo BestebroerViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.
Nicholas C WuDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, United States.
Bart L HaagmansViroscience Department, Erasmus Medical Center, Rotterdam, Netherlands.ORCID 0000-0001-6221-2015

Funding

Netherlands Organization for Health Research and Development 10150062010008PPP allowance LSHM19136ZonMw 10150062010008
6 · The paper itself

Abstract

Virus propagation methods generally use transformed cell lines to grow viruses from clinical specimens, which may force viruses to rapidly adapt to cell culture conditions, a process facilitated by high viral mutation rates. Upon propagation in VeroE6 cells, SARS-CoV-2 may mutate or delete the multibasic cleavage site (MBCS) in the spike protein. Previously, we showed that the MBCS facilitates serine protease-mediated entry into human airway cells (Mykytyn et al., 2021). Here, we report that propagating SARS-CoV-2 on the human airway cell line Calu-3 - that expresses serine proteases - prevents cell culture adaptations in the MBCS and directly adjacent to the MBCS (S686G). Similar results were obtained using a human airway organoid-based culture system for SARS-CoV-2 propagation. Thus, in-depth knowledge on the biology of a virus can be used to establish methods to prevent cell culture adaptation.

Indexed as

Epithelial CellsVirus InternalizationAnimalsCell LineChlorocebus aethiopsHumansProteolysisRespiratory SystemSARS-CoV-2Serine ProteasesSpike Glycoprotein, CoronavirusVirus CultivationSerine ProteasesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2airway organoidscell culture adaptationCOVID-19furin cleavage siteinfectious diseasemicrobiologySARS-CoV-2serine proteasesvirus

Identifiers

PMID33835028
PMCPMC8131099

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.