Evidence map›Paper›PMID 33833369›Full record

ArticleScientific reports2021

Genetic variants of programmed cell death 1 are associated with HBV infection and liver disease progression.

Nghiem Xuan Hoan, Pham Thi Minh Huyen, Mai Thanh Binh, Ngo Tat Trung, Dao Phuong Giang, Bui Thuy Linh, Dang Thi Ngoc Dung, Srinivas Reddy Pallerla, Peter G Kremsner, Thirumalaisamy P Velavan and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Analysis of angiogenesis-related subtypes of hepatocellular carcinoma and tumor microenvironment infiltration feature in hepatocellular carcinoma.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Nghiem Xuan HoanDepartment of Blood-Borne Infectious Diseases, Institute of Clinical Infectious Diseases, 108 Institute of Clinical Medical and Pharmaceutical Sciences, Hanoi, Vietnam. nghiemxuanhoan@gmail.com.
Pham Thi Minh HuyenDepartment of Blood-Borne Infectious Diseases, Institute of Clinical Infectious Diseases, 108 Institute of Clinical Medical and Pharmaceutical Sciences, Hanoi, Vietnam.
Mai Thanh BinhVietnamese-German Center for Medical Research (VG-CARE), Hanoi, Vietnam.
Ngo Tat TrungCentre for Genetic Consultation and Cancer Screening, 108 Institute of Clinical Medical and Pharmaceutical Sciences, Hanoi, Vietnam.
Dao Phuong GiangVietnamese-German Center for Medical Research (VG-CARE), Hanoi, Vietnam.
Bui Thuy LinhVietnamese-German Center for Medical Research (VG-CARE), Hanoi, Vietnam.
Dang Thi Ngoc DungHanoi Medical University, Hanoi, Vietnam.
Srinivas Reddy PallerlaInstitute for Tropical Medicine, University Hospital Tübingen, Tübingen, Germany.
Peter G KremsnerInstitute for Tropical Medicine, University Hospital Tübingen, Tübingen, Germany.
Thirumalaisamy P VelavanVietnamese-German Center for Medical Research (VG-CARE), Hanoi, Vietnam.
Mai Hong BangVietnamese-German Center for Medical Research (VG-CARE), Hanoi, Vietnam.
Le Huu SongDepartment of Blood-Borne Infectious Diseases, Institute of Clinical Infectious Diseases, 108 Institute of Clinical Medical and Pharmaceutical Sciences, Hanoi, Vietnam.
Hanoi Medical University · VNVietnamese - German Center of Excellence in Medical Research · VNCentre de Recherche Médicales de Lambaréné · GAUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The inhibitory effects of programmed cell death 1/programmed cell death ligand 1 (PD-1/PD-L1) modulates T-cell depletion. T-cell depletion is one of the key mechanisms of hepatitis B virus (HBV) persistence, in particular liver disease progression and the development of hepatocellular carcinoma (HCC). This case-control study aimed to understand the significance of PD-1 polymorphisms (PD-1.5 and PD-1.9) association with HBV infection risk and HBV-induced liver disease progression. Genotyping of PD-1.5 and PD-1.9 variants was performed by direct Sanger sequencing in 682 HBV-infected patients including chronic hepatitis (CHB, n = 193), liver cirrhosis (LC, n = 183), hepatocellular carcinoma (HCC, n = 306) and 283 healthy controls (HC). To analyze the association of PD-1 variants with liver disease progression, a binary logistic regression, adjusted for age and gender, was performed using different genetic models. The PD-1.9 T allele and PD-1.9 TT genotype are significantly associated with increased risk of LC, HCC, and LC + HCC. The frequencies of PD-1.5 TT genotype and PD-1.5 T allele are significantly higher in HCC compared to LC patients. The haplotype CT (PD-1.5 C and PD-1.9 T) was significantly associated with increased risk of LC, HCC, and LC + HCC. In addition, the TC (PD-1.5 T and PD-1.9 C) haplotype was associated with the risk of HCC compared to non-HCC. The PD-1.5 CC, PD-1.9 TT, genotype, and the CC (PD-1.5 C and PD-1.9) haplotype are associated with unfavorable laboratory parameters in chronic hepatitis B patients. PD-1.5 and PD1.9 are useful prognostic predictors for HBV infection risk and liver disease progression.

Indexed as

Carcinoma, HepatocellularHepatitis B, ChronicLiver CirrhosisLiver NeoplasmsAdolescentAdultAgedAged, 80 and overB7-H1 AntigenCase-Control StudiesDisease ProgressionFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedB7-H1 AntigenCD274 protein, humanPDCD1 protein, humanProgrammed Cell Death 1 Receptor

Identifiers

PMID33833369
PMCPMC8032722
OpenAlexW3149440705

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.