Evidence map›Paper›PMID 33833232›Full record

ArticleNature communications2021

Symbiotic polyamine metabolism regulates epithelial proliferation and macrophage differentiation in the colon.

Atsuo Nakamura, Shin Kurihara, Daisuke Takahashi, Wakana Ohashi, Yutaka Nakamura, Shunsuke Kimura, Masayoshi Onuki, Aiko Kume, Yukiko Sasazawa, Yukihiro Furusawa and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 166 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
166citing papers in PubMed, 1 pooled it
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

166 citing papers in PubMed, 1 synthesis or guideline pooled it, 230 citations in OpenAlex.

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  8. Functional Characterization of the P-Type ATPases ATP13A3 and ATP13A4 as Plasma Membrane Polyamine Transporters.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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106 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Atsuo NakamuraDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.ORCID 0000-0003-0758-8727
Shin KuriharaFaculty of Bioresources and Environmental Sciences, Ishikawa Prefectural University, Nonoichi, Ishikawa, Japan.
Daisuke TakahashiDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.ORCID 0000-0001-8624-1160
Wakana OhashiDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.
Yutaka NakamuraDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.
Shunsuke KimuraDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.
Masayoshi OnukiDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.
Aiko KumeDairy Science and Technology Institute, Kyodo Milk Industry Co., Ltd., Hinode-machi, Nishitama-gun, Tokyo, Japan.
Yukiko SasazawaDepartment of Neurology, Graduate School of Medicine, Juntendo University, Bunkyo-ku, Tokyo, Japan.
Yukihiro FurusawaDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.
Yuuki ObataDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan.ORCID 0000-0001-5461-3521
Shinji FukudaPRESTO, Japan Science and Technology Agency, Kawaguchi, Saitama, Japan.ORCID 0000-0001-5161-9880
Shinji SaikiDepartment of Neurology, Graduate School of Medicine, Juntendo University, Bunkyo-ku, Tokyo, Japan.
Mitsuharu MatsumotoDairy Science and Technology Institute, Kyodo Milk Industry Co., Ltd., Hinode-machi, Nishitama-gun, Tokyo, Japan. m-matumoto@meito.co.jp.ORCID 0000-0002-0378-3077
Koji HaseDivision of Biochemistry, Faculty of Pharmacy and Graduate School of Pharmaceutical Science, Keio University, Minato-ku, Tokyo, Japan. hase-kj@pha.keio.ac.jp.ORCID 0000-0001-9550-2334
Keio University · JPJuntendo University · JPMegmilk Snow Brand (Japan) · JPIshikawa Prefectural University · JPUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intestinal microbiota-derived metabolites have biological importance for the host. Polyamines, such as putrescine and spermidine, are produced by the intestinal microbiota and regulate multiple biological processes. Increased colonic luminal polyamines promote longevity in mice. However, no direct evidence has shown that microbial polyamines are incorporated into host cells to regulate cellular responses. Here, we show that microbial polyamines reinforce colonic epithelial proliferation and regulate macrophage differentiation. Colonisation by wild-type, but not polyamine biosynthesis-deficient, Escherichia coli in germ-free mice raises intracellular polyamine levels in colonocytes, accelerating epithelial renewal. Commensal bacterium-derived putrescine increases the abundance of anti-inflammatory macrophages in the colon. The bacterial polyamines ameliorate symptoms of dextran sulfate sodium-induced colitis in mice. These effects mainly result from enhanced hypusination of eukaryotic initiation translation factor. We conclude that bacterial putrescine functions as a substrate for symbiotic metabolism and is further absorbed and metabolised by the host, thus helping maintain mucosal homoeostasis in the intestine.

Indexed as

AnimalsCell DifferentiationCell ProliferationColitisColonDextran SulfateEpithelial CellsEscherichia coliEukaryotic Translation Initiation Factor 5AFemaleGastrointestinal MicrobiomeHomeostasisIntestinal MucosaMacrophagesMaleMiceDextran SulfateEukaryotic Translation Initiation Factor 5APeptide Initiation FactorsPutrescineRNA-Binding Proteins

Identifiers

PMID33833232
PMCPMC8032791
OpenAlexW3142445645

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.