Evidence map›Paper›PMID 33833229›Full record

ArticleNature communications2021

Smc5/6 functions with Sgs1-Top3-Rmi1 to complete chromosome replication at natural pause sites.

Sumedha Agashe, Chinnu Rose Joseph, Teresa Anne Clarisse Reyes, Demis Menolfi, Michele Giannattasio, Anja Waizenegger, Barnabas Szakal, Dana Branzei

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Allelic Analysis ofInternational journal of molecular sciences · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Genome control by SMC complexes.Nature reviews. Molecular cell biology · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Sumedha AgasheIFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.ORCID 0000-0002-9138-6169
Chinnu Rose Joseph *IFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.
Teresa Anne Clarisse Reyes *IFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.
Demis MenolfiIFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.ORCID 0000-0002-3824-9931
Michele GiannattasioIFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.ORCID 0000-0001-7099-5718
Anja WaizeneggerIFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.
Barnabas Szakal *IFOM, the FIRC Institute of Molecular Oncology, Milan, Italy.ORCID 0000-0001-6888-1383
Dana BranzeiIFOM, the FIRC Institute of Molecular Oncology, Milan, Italy. dana.branzei@ifom.eu.ORCID 0000-0002-0544-4888
IFOM · ITUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Smc5/6 is essential for genome structural integrity by yet unknown mechanisms. Here we find that Smc5/6 co-localizes with the DNA crossed-strand processing complex Sgs1-Top3-Rmi1 (STR) at genomic regions known as natural pausing sites (NPSs) where it facilitates Top3 retention. Individual depletions of STR subunits and Smc5/6 cause similar accumulation of joint molecules (JMs) composed of reversed forks, double Holliday Junctions and hemicatenanes, indicative of Smc5/6 regulating Sgs1 and Top3 DNA processing activities. We isolate an intra-allelic suppressor of smc6-56 proficient in Top3 retention but affected in pathways that act complementarily with Sgs1 and Top3 to resolve JMs arising at replication termination. Upon replication stress, the smc6-56 suppressor requires STR and Mus81-Mms4 functions for recovery, but not Srs2 and Mph1 helicases that prevent maturation of recombination intermediates. Thus, Smc5/6 functions jointly with Top3 and STR to mediate replication completion and influences the function of other DNA crossed-strand processing enzymes at NPSs.

Indexed as

Cell Cycle ProteinsDNA-Binding ProteinsDNA RepairDNA ReplicationEndonucleasesFlap EndonucleasesGenome, FungalRecQ HelicasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell Cycle ProteinsDNA-Binding ProteinsEndonucleasesFlap EndonucleasesMMS4 protein, S cerevisiaeMUS81 protein, S cerevisiaeRecQ HelicasesRmi1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiaeSMC5 protein, S cerevisiaeSMC6 protein, S cerevisiaeTOP3 protein, S cerevisiae

Identifiers

PMID33833229
PMCPMC8032827
OpenAlexW3150177260

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.