Evidence map›Paper›PMID 33833053›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Overexpression of CD47 is associated with brain overgrowth and 16p11.2 deletion syndrome.

Jingling Li, Thomas Brickler, Allison Banuelos, Kristopher Marjon, Anna Shcherbina, Sravani Banerjee, Jing Bian, Cyndhavi Narayanan, Irving L Weissman, Sundari Chetty

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  6. Cell villages and Dirichlet modeling map human cell fitness genetics.bioRxiv : the preprint server for biology · 2025
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  9. Macrophages release neuraminidase and cleaved calreticulin for programmed cell removal.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  19. Cell death by phagocytosis.Nature reviews. Immunology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jingling LiDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305.
Thomas BricklerDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0002-1580-4808
Allison BanuelosInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, CA 94305.
Kristopher MarjonInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, CA 94305.
Anna ShcherbinaDepartment of Biomedical Informatics, Stanford University, Stanford, CA 94305.ORCID 0000-0002-5080-5494
Sravani BanerjeeDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0003-2538-5464
Jing BianDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305.
Cyndhavi NarayananDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0001-8662-599X
Irving L WeissmanInstitute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, CA 94305; irv@stanford.edu chettys@stanford.edu.ORCID 0000-0002-9077-7467
Sundari ChettyDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305; irv@stanford.edu chettys@stanford.edu.ORCID 0000-0003-1940-9538
Stanford University · US

Funding

Specifying and Treating the Anxiety Phenotype in Autism Spectrum DisorderP50HD093079 · NICHD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI AMARAL, DAVID G · 2017 to 2021
$11.4M
HSC Diversity: Regulation by Clonal Selection vs Epigenetic InductionR01CA086065 · NCI · STANFORD UNIVERSITY · PI WEISSMAN, IRVING L. · 2000 to 2017
$6.9M
Stem Cell Biology, Cancer Stem Cell Biology, and Cancer ImmunotherapyR35CA220434 · NCI · STANFORD UNIVERSITY · PI WEISSMAN, IRVING L. · 2017 to 2023
$6.7M
NCI NIH HHS R01 CA086065NCI NIH HHS R35 CA220434NICHD NIH HHS P50 HD093079
6 · The paper itself

Abstract

Copy number variation (CNV) at the 16p11.2 locus is associated with neuropsychiatric disorders, such as autism spectrum disorder and schizophrenia. CNVs of the 16p gene can manifest in opposing head sizes. Carriers of 16p11.2 deletion tend to have macrocephaly (or brain enlargement), while those with 16p11.2 duplication frequently have microcephaly. Increases in both gray and white matter volume have been observed in brain imaging studies in 16p11.2 deletion carriers with macrocephaly. Here, we use human induced pluripotent stem cells (hiPSCs) derived from controls and subjects with 16p11.2 deletion and 16p11.2 duplication to understand the underlying mechanisms regulating brain overgrowth. To model both gray and white matter, we differentiated patient-derived iPSCs into neural progenitor cells (NPCs) and oligodendrocyte progenitor cells (OPCs). In both NPCs and OPCs, we show that CD47 (a "don't eat me" signal) is overexpressed in the 16p11.2 deletion carriers contributing to reduced phagocytosis both in vitro and in vivo. Furthermore, 16p11.2 deletion NPCs and OPCs up-regulate cell surface expression of calreticulin (a prophagocytic "eat me" signal) and its binding sites, indicating that these cells should be phagocytosed but fail to be eliminated due to elevations in CD47. Treatment of 16p11.2 deletion NPCs and OPCs with an anti-CD47 antibody to block CD47 restores phagocytosis to control levels. While the CD47 pathway is commonly implicated in cancer progression, we document a role for CD47 in psychiatric disorders associated with brain overgrowth.

Indexed as

AdolescentAdultAnimalsAutistic DisorderBrainCalreticulinCD47 AntigenCell LineCells, CulturedChildChild, PreschoolChromosome DeletionChromosome DisordersChromosomes, Human, Pair 16FemaleHumansCalreticulinCD47 Antigen16p11.2 deletionCD47iPSCsmacrocephaly

Identifiers

PMID33833053
PMCPMC8053942
OpenAlexW3143266259

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.