Evidence map›Paper›PMID 33831347›Full record

ReviewNeuron2021

Improving scalability in systems neuroscience.

Zhe Sage Chen, Bijan Pesaran

Abstract readReview
In one paragraph

Review in Neuron, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. How our understanding of memory replay evolves.Journal of neurophysiology · 2023
    Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Zhe Sage ChenDepartment of Psychiatry, Department of Neuroscience and Physiology, New York University School of Medicine, New York, NY 10016, USA; Neuroscience Institute, NYU School of Medicine, New York, NY 10016, USA. Electronic address: zhe.chen@nyulangone.org.
Bijan PesaranNeuroscience Institute, NYU School of Medicine, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA; Department of Neurology, New York University School of Medicine, New York, NY 10016, USA. Electronic address: bijan@nyu.edu.

Funding

Optimizing flexible, active electrode arrays for chronic, large-scale recording and stimulation on the scale of 100,000 electrodesU01NS099697 · NINDS · DUKE UNIVERSITY · PI BRAUN, PAUL, PESARAN, BIJAN · 2016 to 2018
$3.5M
Predictive models of brain dynamics during decision making and their validation using distributed optogenetic stimulationR01NS104923 · NINDS · NEW YORK UNIVERSITY · PI KIANI, ROOZBEH · 2017 to 2021
$3.5M
A microscope optimized for brain-scale 2-photon imagingU01NS103518 · NINDS · NEW YORK UNIVERSITY · PI PESARAN, BIJAN · 2017 to 2019
$2.9M
Multiple spatial representations during visually-guided behaviorR01EY024067 · NEI · NEW YORK UNIVERSITY · PI PESARAN, BIJAN · 2014 to 2018
$1.9M
CRNS: An Integrative Study of Hippocampal-Neocortical Memory Coding during Sleep R01MH118928 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CHEN, ZHE SAGE, WILSON, MATTHEW A · 2018 to 2022
$1.8M
CRCN: Dissecting Neural Circuits for Acute PainR01NS100065 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CHEN, ZHE SAGE, WANG, JING · 2016 to 2019
$1.5M
NEI NIH HHS R01 EY024067NIMH NIH HHS R01 MH118928NINDS NIH HHS R01 NS100065NINDS NIH HHS R01 NS104923NINDS NIH HHS U01 NS099697NINDS NIH HHS U01 NS103518
6 · The paper itself

Abstract

Emerging technologies to acquire data at increasingly greater scales promise to transform discovery in systems neuroscience. However, current exponential growth in the scale of data acquisition is a double-edged sword. Scaling up data acquisition can speed up the cycle of discovery but can also misinterpret the results or possibly slow down the cycle because of challenges presented by the curse of high-dimensional data. Active, adaptive, closed-loop experimental paradigms use hardware and algorithms optimized to enable time-critical computation to provide feedback that interprets the observations and tests hypotheses to actively update the stimulus or stimulation parameters. In this perspective, we review important concepts of active and adaptive experiments and discuss how selectively constraining the dimensionality and optimizing strategies at different stages of discovery loop can help mitigate the curse of high-dimensional data. Active and adaptive closed-loop experimental paradigms can speed up discovery despite an exponentially increasing data scale, offering a road map to timely and iterative hypothesis revision and discovery in an era of exponential growth in neuroscience.

Indexed as

AnimalsBrainFeedbackHumansNeurosciencesResearch DesignSystems Biology

Identifiers

PMID33831347
PMCPMC8178195

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.