Evidence map›Paper›PMID 33830530›Full record

ArticleJournal of medical virology2021

Association between the HLA genotype and the severity of COVID-19 infection among South Asians.

Fatmah M A Naemi, Shurooq Al-Adwani, Heba Al-Khatabi, Ashwaq Al-Nazawi

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 3 pooled it
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 3 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Fatmah M A NaemiLaboratory of Histocompatibility and Immunogenetics, King Fahd General Hospital, Ministry of Health, Jeddah, Kingdom of Saudi Arabia.ORCID 0000-0002-5701-1865
Shurooq Al-AdwaniLaboratory of Histocompatibility and Immunogenetics, King Fahd General Hospital, Ministry of Health, Jeddah, Kingdom of Saudi Arabia.
Heba Al-KhatabiCenter of Excellence in Genomic Medicine Research, King Fahd Medical Research Center, King Abdul-Aziz University, Jeddah, Kingdom of Saudi Arabia.
Ashwaq Al-NazawiPublic Health VBD, Ministry of Health, Jeddah, Kingdom of Saudi Arabia.ORCID 0000-0001-9528-1893
King Fahad Hospital Jeddah · SAKing Abdulaziz University · SAMinistry of Health · SA

Funding

King Abdulaziz City for Science and Technology 5-20-01-502-0009
6 · The paper itself

Abstract

Regional variations are found in the incidence and severity of the COVID-19 infection. Human leukocyte antigen (HLA) polymorphism is one of the genetic factors that might have an impact on the outcome of the disease. This study explored the association between the HLA genotype and the severity of COVID-19 among patients from South Asia. Blood samples from 95 Asians (Bangladeshis, Indians, and Pakistanis) with COVID-19 were collected. The patients were divided according to the severity of their infection: mild (N = 64), severe (N = 31), and fatal (N = 20). DNA was extracted from all samples, and HLA genotyping was performed for both class I (A, B, and C) and class II (DRB1, DQA1, and DQB1) using the PCR-rSSO (polymerase chain reaction-reverse sequence-specific oligonucleotide) molecular method. The frequency of HLA-B*51 was significantly higher among patients in the fatal group than among those in the mild infection group (15% vs. 4.7%, p = 0.027). Additionally, the frequency of HLA-B*35 was significantly higher in the mild infection group than in the fatal group (21.1% vs. 7.5%, p = 0.050 [a borderline p-value]). In terms of HLA class II, DRB1*13 was significantly observed in the fatal group than in the mild infection group (17.5% vs. 11.3%, p = 0.049). However, the p-value for all alleles became insignificant after a statistical correction for the p-values (p

Indexed as

BangladeshCOVID-19Gene FrequencyGenetic Association StudiesGenotypeHLA-A AntigensHLA-B AntigensHLA-C AntigensHLA-DQ alpha-ChainsHLA-DQ beta-ChainsHumansIndiaPakistanPolymorphism, Single NucleotideSARS-CoV-2Severity of Illness IndexHLA-A AntigensHLA-B AntigensHLA-C AntigensHLA-DQ alpha-ChainsHLA-DQ beta-ChainsCOVID-19HLAseveritySouth Asia

Identifiers

PMID33830530
PMCPMC8251353
OpenAlexW3151280455

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.