Evidence map›Paper›PMID 33828386›Full record

ArticleJournal of pharmacy & bioallied sciences2020

Docking Studies and Molecular Dynamics Simulation of

Yeni Yeni, Supandi Supandi, Lusi P Dwita, Suswandari Suswandari, Maizatul S Shaharun, Nonni S Sambudi

Abstract read
In one paragraph

Article in Journal of pharmacy & bioallied sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Journal of public health in Africa · 2023
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yeni YeniDepartment of Pharmacy, Universitas Muhammadiyah Prof. DR. HAMKA, Jakarta, Indonesia.
Supandi SupandiDepartment of Pharmacy, Universitas Muhammadiyah Prof. DR. HAMKA, Jakarta, Indonesia.
Lusi P DwitaDepartment of Pharmacy, Universitas Muhammadiyah Prof. DR. HAMKA, Jakarta, Indonesia.
Suswandari SuswandariDepartment of Postgraduate of Social Science Education, Universitas Muhammadiyah Prof. DR. HAMKA, Jakarta, Indonesia.
Maizatul S ShaharunDepartment of Fundamental & Applied Sciences, Universiti Teknologi PETRONAS, Perak, Malaysia.
Nonni S SambudiDepartment of Fundamental & Applied Sciences, Universiti Teknologi PETRONAS, Perak, Malaysia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInflammatory mediators produced by cyclooxygenase (COX) and lipoxygenase (LOX) pathways are responsible for many human diseases, such as cancer, arthritis, and neurological disorders. Flavonoid-containing plants, such as

objectivesThis study aimed to predict the actions of 10 compounds in MATERIALS AND

methodsThe compounds were screened through docking studies using PLANTS. Also, the molecular dynamics simulation was conducted using GROMACS at 310K.

resultsThe results showed that the most significant binding affinity toward LOX was shown by YGM-0a and YGM-0a, and the LOX complex in molecular dynamics simulation showed stability for 20 ns.

conclusionBased on Docking Studies and Molecular Dynamics Simulation of

Indexed as

Anti-inflammatorydockingIpomoea batatas L.lipoxygenasemolecular dynamics

Identifiers

PMID33828386
PMCPMC8021039

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.