Evidence map›Paper›PMID 33827897›Full record

ArticleScience immunology2021

SARS-CoV-2 drives JAK1/2-dependent local complement hyperactivation.

Bingyu Yan, Tilo Freiwald, Daniel Chauss, Luopin Wang, Erin West, Carmen Mirabelli, Charles J Zhang, Eva-Maria Nichols, Nazish Malik, Richard Gregory and 20 more

Open access · hybridAbstract read
In one paragraph

Article in Science immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed, 1 pooled it
11.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 1 synthesis or guideline pooled it, 200 citations in OpenAlex.

  1. JAK inhibitors and COVID-19.Journal for immunotherapy of cancer · 2022
    Pooled it
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  14. Emerging roles for complement in lung transplantation.The Journal of clinical investigation · 2025
    Review
  15. Article
  16. Review
  17. Review
  18. Inside job: Roles of intracellular C3.The Journal of allergy and clinical immunology · 2025
    Review
  19. Article
  20. Article

78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 12 institutions in 4 countries.

Bingyu Yan *Department of Biochemistry, Purdue University, West Lafayette, IN, USA.ORCID 0000-0003-4429-8200
Tilo Freiwald *Immunoregulation Section, Kidney Diseases Branch, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), NIH, Bethesda, MD, USA.ORCID 0000-0002-4759-717X
Daniel Chauss *Immunoregulation Section, Kidney Diseases Branch, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), NIH, Bethesda, MD, USA.
Luopin Wang *Department of Computer Science, Purdue University, West Lafayette, IN, USA.ORCID 0000-0001-5758-4092
Erin West *Complement and Inflammation Research Section (CIRS), National Heart, Lung, and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA.ORCID 0000-0002-7103-8394
Carmen MirabelliDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA.
Charles J ZhangDepartment of Medicinal Chemistry, College of Pharmacy, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-0300-849X
Eva-Maria NicholsGlaxoSmithKline, Stevenage, UK.ORCID 0000-0001-7636-6154
Nazish MalikGlaxoSmithKline, Stevenage, UK.ORCID 0000-0002-9756-9281
Richard GregoryGlaxoSmithKline, Stevenage, UK.ORCID 0000-0003-1527-9078
Marcus BantscheffGlaxoSmithKline, Stevenage, UK.ORCID 0000-0002-8343-8977
Sonja Ghidelli-DisseGlaxoSmithKline, Stevenage, UK.ORCID 0000-0002-7735-9746
Martin KolevGlaxoSmithKline, Stevenage, UK.ORCID 0000-0002-7208-3875
Tristan FrumDepartment of Internal Medicine, Gastroenterology, Michigan Medicine at the University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-3452-8762
Jason R SpenceDepartment of Internal Medicine, Gastroenterology, Michigan Medicine at the University of Michigan, Ann Arbor, MI, USA.
Jonathan Z SextonDepartment of Medicinal Chemistry, College of Pharmacy, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-9244-5888
Konstantinos D AlysandratosCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA, 1702118, USA.
Darrell N KottonCenter for Regenerative Medicine of Boston University and Boston Medical Center, Boston, MA, 1702118, USA.ORCID 0000-0002-9604-8476
Stefania PittalugaLaboratory of Pathology, Center for Cancer Research, National Cancer Institute (NCI), NIH, Bethesda, MD, USA.ORCID 0000-0001-7688-1439
Jack BibbyComplement and Inflammation Research Section (CIRS), National Heart, Lung, and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA.
Nathalie NiyonzimaCenter of Molecular Inflammation Research (CEMIR), Department of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology (NTNU), 7491 Trondheim, Norway.ORCID 0000-0001-8094-3073
Matthew R OlsonDepartment of Biological Sciences, Purdue University, West Lafayette, IN, USA.
Shahram KordastiCRUK-KHP Centre, Comprehensive Cancer Centre, King's College London, London, UK.ORCID 0000-0002-0347-4207
Didier PortillaImmunoregulation Section, Kidney Diseases Branch, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), NIH, Bethesda, MD, USA.
Christiane E WobusDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0001-5286-0924
Arian LaurenceNuffield Department of Medicine, University of Oxford, UK.ORCID 0000-0003-0942-8292
Michail S LionakisFungal Pathogenesis Section, Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases (NIAID), NIH, Bethesda, MD, USA.ORCID 0000-0003-4994-9500
Claudia Kemper *Complement and Inflammation Research Section (CIRS), National Heart, Lung, and Blood Institute (NHLBI), National Institutes of Health (NIH), Bethesda, MD, USA. claudia.kemper@nih.gov behdad.afzali@nih.gov kazemian@purdue.edu.ORCID 0000-0003-4196-1417
Behdad Afzali *Immunoregulation Section, Kidney Diseases Branch, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), NIH, Bethesda, MD, USA. claudia.kemper@nih.gov behdad.afzali@nih.gov kazemian@purdue.edu.ORCID 0000-0003-2968-1156
Majid Kazemian *Department of Biochemistry, Purdue University, West Lafayette, IN, USA. claudia.kemper@nih.gov behdad.afzali@nih.gov kazemian@purdue.edu.ORCID 0000-0001-7080-8820
GlaxoSmithKline (United Kingdom) · GBUniversity of Michigan · USPurdue University West Lafayette · USNational Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · USBoston University · USGoethe University Frankfurt · DEGuy's Hospital · GBNational Cancer Institute · USNational Institute of Allergy and Infectious Diseases · USNorwegian University of Science and Technology · NOUniversity of Oxford · GB

Funding

Immunopathogenesis of Fungal InfectionsZIAAI001175 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI LIONAKIS, MICHAIL · 2012 to 2025
$23.9M
Unravelling immunoregulatory circuits of tissue inflammationZIADK075149 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI AFZALI, BEHDAD · 2019 to 2025
$19.3M
Tissue Engineering and RegenerationT32DE007057 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAVID H. KOHN · 1985 to 2026
$17.3M
The role of the intracellular complement system - the complosome - in Th1 biologyZIAHL006223 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI KEMPER, CLAUDIA · 2017 to 2025
$16.9M
Hematopathology DiagnosisZIABC011070 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI JAFFE, ELAINE · 2009 to 2025
$14.5M
Supplement to a Hox-Wnt-Sox signaling axis regulates lung development, patterning and branchingR01HL119215 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SPENCE, JASON · 2013 to 2021
$4.2M
Joint submission for administrative supplement proposal: HIPAA aligned storage and computing solutionR35GM138283 · NIGMS · PURDUE UNIVERSITY · PI KAZEMIAN, MAJID · 2020 to 2024
$2.0M
Expression, regulation, and role of enhancer RNAs in T helper cellsK22HL125593 · NHLBI · PURDUE UNIVERSITY · PI KAZEMIAN, MAJID · 2017 to 2019
$747k
Role of intracellular complement activation in kidney fibrosisR01DK122624 · NIDDK · UNIVERSITY OF VIRGINIA · PI PORTILLA, DIDIER · 2020 to 2022
$727k
The pathogenesis of COVID-19ZIAAI001318 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI LIONAKIS, MICHAIL · 2020 to 2023
$290k
The role of complement in COVID-19 ZIAHL006254 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI KEMPER, CLAUDIA · 2020 to 2022
$203k
Intramural NIH HHS ZIA AI001175Intramural NIH HHS ZIA DK075149Intramural NIH HHS ZIA HL006223NHLBI NIH HHS K22 HL125593NHLBI NIH HHS R01 HL119215NIDCR NIH HHS T32 DE007057NIDDK NIH HHS R01 DK122624NIGMS NIH HHS R35 GM138283NIH HHS 5K22HL125593
6 · The paper itself

Abstract

Patients with coronavirus disease 2019 (COVID-19) present a wide range of acute clinical manifestations affecting the lungs, liver, kidneys and gut. Angiotensin converting enzyme (ACE) 2, the best-characterized entry receptor for the disease-causing virus SARS-CoV-2, is highly expressed in the aforementioned tissues. However, the pathways that underlie the disease are still poorly understood. Here, we unexpectedly found that the complement system was one of the intracellular pathways most highly induced by SARS-CoV-2 infection in lung epithelial cells. Infection of respiratory epithelial cells with SARS-CoV-2 generated activated complement component C3a and could be blocked by a cell-permeable inhibitor of complement factor B (CFBi), indicating the presence of an inducible cell-intrinsic C3 convertase in respiratory epithelial cells. Within cells of the bronchoalveolar lavage of patients, distinct signatures of complement activation in myeloid, lymphoid and epithelial cells tracked with disease severity. Genes induced by SARS-CoV-2 and the drugs that could normalize these genes both implicated the interferon-JAK1/2-STAT1 signaling system and NF-κB as the main drivers of their expression. Ruxolitinib, a JAK1/2 inhibitor, normalized interferon signature genes and all complement gene transcripts induced by SARS-CoV-2 in lung epithelial cell lines, but did not affect NF-κB-regulated genes. Ruxolitinib, alone or in combination with the antiviral remdesivir, inhibited C3a protein produced by infected cells. Together, we postulate that combination therapy with JAK inhibitors and drugs that normalize NF-κB-signaling could potentially have clinical application for severe COVID-19.

Indexed as

Complement ActivationMAP Kinase Signaling SystemCell Line, TumorComplement C3aComplement Factor BCOVID-19Epithelial CellsHumansJanus Kinase 1Janus Kinase 2LungSARS-CoV-2Complement C3aComplement Factor BJAK1 protein, humanJAK2 protein, humanJanus Kinase 1Janus Kinase 2

Identifiers

PMID33827897
PMCPMC8139422
OpenAlexW3143497192

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.