ArticleBMC genomics2021
Identification of a major-effect QTL associated with pre-harvest sprouting in cucumber (Cucumis sativus L.) using the QTL-seq method.
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Article
- QTL-Seq Identifies Extra QTLs and Candidate Genes Controlling High Haploid Induction Rate in Maize.Plants (Basel, Switzerland) · 2026Article
- Article
- Prediction of transcript isoforms and identification of tissue-specific genes in cucumber.BMC genomics · 2025Article
- Fine mapping of the major-effect QTLFrontiers in plant science · 2025Article
- Article
- Identification of Genomic Regions Associated with Differences in Flowering Time and Inflorescence Architecture betweenInternational journal of molecular sciences · 2024Article
- Evaluation ofMicroorganisms · 2024Article
- Editorial: Seed dormancy, germination, and pre-harvest sprouting, volume II.Frontiers in plant science · 2024Article
- Article
- Article
- Advance Research on the Pre-Harvest Sprouting Trait in Vegetable Crop Seeds.International journal of molecular sciences · 2023Review
- Comparative transcriptomic analysis provides insights into the molecular basis underlying pre-harvest sprouting in rice.BMC genomics · 2022Article
- Exploring Breakthroughs in Three Traits Belonging to Seed Life.Plants (Basel, Switzerland) · 2022Review
- Identification of a major QTL,Frontiers in plant science · 2022Article
- A preliminary mapping of QTLFrontiers in plant science · 2022Article
- Identification of single major QTL and candidate gene(s) governing hull-less seed trait in pumpkin.Frontiers in plant science · 2022Article
- Whole genome resequencing identifies candidate genes and allelic diagnostic markers for resistance toFrontiers in plant science · 2022Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundCucumber (Cucumis sativus L.) is cultivated worldwide, and it is essential to produce enough high-quality seeds to meet demand. Pre-harvest sprouting (PHS) in cucumber is a critical problem and causes serious damage to seed production and quality. Nevertheless, the genetic basis and molecular mechanisms underlying cucumber PHS remain unclear. QTL-seq is an efficient approach for rapid quantitative trait loci (QTL) identification that simultaneously takes advantage of bulked-segregant analysis (BSA) and whole-genome resequencing. In the present research, QTL-seq analysis was performed to identify QTLs associated with PHS in cucumber using an F
resultsTwo QTLs that spanned 7.3 Mb on Chromosome 4 and 0.15 Mb on Chromosome 5 were identified by QTL-seq and named qPHS4.1 and qPHS5.1, respectively. Subsequently, SNP and InDel markers selected from the candidate regions were used to refine the intervals using the extended F
conclusionsThese results provide novel insights into the genetic mechanism controlling PHS in cucumber and highlight the potential for marker-assisted selection of PHS resistance breeding.
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