Evidence map›Paper›PMID 33826682›Full record

ArticlePLoS pathogens2021

Toggle switch residues control allosteric transitions in bacterial adhesins by participating in a concerted repacking of the protein core.

Dagmara I Kisiela, Pearl Magala, Gianluca Interlandi, Laura A Carlucci, Angelo Ramos, Veronika Tchesnokova, Benjamin Basanta, Vladimir Yarov-Yarovoy, Hovhannes Avagyan, Anahit Hovhannisyan and 4 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Conformational ensembles inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Dagmara I KisielaDepartment of Microbiology, University of Washington, Seattle, Washington, United States of America.
Pearl MagalaDepartment of Biochemistry, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0001-5087-3473
Gianluca InterlandiDepartment of Bioengineering, University of Washington, Seattle, Washington, United States of America.
Laura A CarlucciDepartment of Bioengineering, University of Washington, Seattle, Washington, United States of America.
Angelo RamosDepartment of Biochemistry, University of Washington, Seattle, Washington, United States of America.
Veronika TchesnokovaDepartment of Microbiology, University of Washington, Seattle, Washington, United States of America.
Benjamin BasantaDepartment of Biochemistry, University of Washington, Seattle, Washington, United States of America.
Vladimir Yarov-YarovoyDepartment of Physiology and Membrane Biology, University of California, Davis, California, United States of America.
Hovhannes AvagyanDepartment of Microbiology, University of Washington, Seattle, Washington, United States of America.
Anahit HovhannisyanDepartment of Microbiology, University of Washington, Seattle, Washington, United States of America.
Wendy E ThomasDepartment of Bioengineering, University of Washington, Seattle, Washington, United States of America.
Ronald E StenkampDepartment of Biochemistry, University of Washington, Seattle, Washington, United States of America.
Rachel E KlevitDepartment of Biochemistry, University of Washington, Seattle, Washington, United States of America.
Evgeni V SokurenkoDepartment of Microbiology, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0003-2806-4121
University of Washington · USUniversity of California, Davis · US

Funding

TRAINING IN MOLECULAR BIOPHYSICST32GM008268 · NIGMS · UNIVERSITY OF WASHINGTON · PI KOLLMAN, JUSTIN M, ZHENG, NING · 1988 to 2023
$8.6M
Conformational dynamics of adhesive bondsR01AI119675 · NIAID · UNIVERSITY OF WASHINGTON · PI SOKURENKO, EVGENI VENIAMINOVIC, THOMAS, WENDY E · 2016 to 2020
$2.9M
Role of type 1 fimbrial mutations in the pathogenesis of pandemic E. coliR21AI147575 · NIAID · UNIVERSITY OF WASHINGTON · PI SOKURENKO, EVGENI VENIAMINOVIC · 2019 to 2020
$428k
NIAID NIH HHS R01 AI119675NIAID NIH HHS R21 AI147575NIGMS NIH HHS T32 GM008268
6 · The paper itself

Abstract

Critical molecular events that control conformational transitions in most allosteric proteins are ill-defined. The mannose-specific FimH protein of Escherichia coli is a prototypic bacterial adhesin that switches from an 'inactive' low-affinity state (LAS) to an 'active' high-affinity state (HAS) conformation allosterically upon mannose binding and mediates shear-dependent catch bond adhesion. Here we identify a novel type of antibody that acts as a kinetic trap and prevents the transition between conformations in both directions. Disruption of the allosteric transitions significantly slows FimH's ability to associate with mannose and blocks bacterial adhesion under dynamic conditions. FimH residues critical for antibody binding form a compact epitope that is located away from the mannose-binding pocket and is structurally conserved in both states. A larger antibody-FimH contact area is identified by NMR and contains residues Leu-34 and Val-35 that move between core-buried and surface-exposed orientations in opposing directions during the transition. Replacement of Leu-34 with a charged glutamic acid stabilizes FimH in the LAS conformation and replacement of Val-35 with glutamic acid traps FimH in the HAS conformation. The antibody is unable to trap the conformations if Leu-34 and Val-35 are replaced with a less bulky alanine. We propose that these residues act as molecular toggle switches and that the bound antibody imposes a steric block to their reorientation in either direction, thereby restricting concerted repacking of side chains that must occur to enable the conformational transition. Residues homologous to the FimH toggle switches are highly conserved across a diverse family of fimbrial adhesins. Replacement of predicted switch residues reveals that another E. coli adhesin, galactose-specific FmlH, is allosteric and can shift from an inactive to an active state. Our study shows that allosteric transitions in bacterial adhesins depend on toggle switch residues and that an antibody that blocks the switch effectively disables adhesive protein function.

Indexed as

Adhesins, BacterialAdhesins, Escherichia coliBacterial AdhesionEscherichia coliFimbriae, BacterialFimbriae ProteinsModels, MolecularProtein BindingAdhesins, BacterialAdhesins, Escherichia coliFimbriae Proteins

Identifiers

PMID33826682
PMCPMC8064603
OpenAlexW3143825433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.