Evidence map›Paper›PMID 33825680›Full record

ArticleeLife2021

Evolution of the complex transcription network controlling biofilm formation in

Eugenio Mancera, Isabel Nocedal, Stephen Hammel, Megha Gulati, Kaitlin F Mitchell, David R Andes, Clarissa J Nobile, Geraldine Butler, Alexander D Johnson

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 49 citations in OpenAlex.

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  18. Genetic modification ofMicrobiology (Reading, England) · 2024
    Article
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  20. Genetic Analysis ofJournal of fungi (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 3 countries.

Eugenio ManceraDepartamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Unidad Irapuato, Irapuato, Mexico.ORCID 0000-0003-0146-8732
Isabel NocedalDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, United States.ORCID 0000-0002-4706-1113
Stephen HammelSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin, Ireland.
Megha GulatiDepartment of Molecular and Cell Biology, University of California, Merced, Merced, United States.
Kaitlin F MitchellDepartment of Medical Microbiology and Immunology, University of Wisconsin, Madison, United States.
David R AndesDepartment of Medical Microbiology and Immunology, University of Wisconsin, Madison, United States.
Clarissa J NobileDepartment of Molecular and Cell Biology, University of California, Merced, Merced, United States.ORCID 0000-0003-0799-6499
Geraldine ButlerSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin, Ireland.ORCID 0000-0002-1770-5301
Alexander D JohnsonDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, United States.
University College Dublin · IEUniversity of California, Merced · USUniversity of California, San Francisco · USCenters for Disease Control and Prevention · USInstituto Tecnológico Superior de Irapuato · MXUniversity of Wisconsin–Madison · US

Funding

Vesicle-mediated drug resistance of Candida albicans biofilmR01AI073289 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI ANDES, DAVID R, MITCHELL, AARON P · 2008 to 2025
$7.9M
The transcriptional circuitry controlling biofilm development in Candida albicansR01AI083311 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSON, ALEXANDER D · 2011 to 2020
$4.3M
Genetic regulation of inter- and intra-species microbial community formationR35GM124594 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI NOBILE, CLARISSA JANE · 2017 to 2021
$2.0M
CONACyT CB-2016-01 282511Consejo Nacional de Ciencia y Tecnología CB-2016-01 282511Human Frontier Science Program LT000484/2012-LHuman Frontiers Science Program LT000484/2012-LNational Institute of Health R21AI125801National Institute of Health R35GM124594National Institute of Health Ro1AI049187National Institute of Health Ro1AI073289National Institute of Health Ro1AI083311NIAID NIH HHS R01 AI073289NIAID NIH HHS R01 AI083311NIGMS NIH HHS R35 GM124594Wellcome Trust 209077/Z/17/Z
6 · The paper itself

Abstract

We examine how a complex transcription network composed of seven 'master' regulators and hundreds of target genes evolved over a span of approximately 70 million years. The network controls biofilm formation in several

Indexed as

BiofilmsEvolution, MolecularCandida albicansGene Regulatory Networksbiofilmcandida albicanscandida dubliniensiscandida parapsilosiscandida tropicalisevolutionary biologytranscriptional evolution

Identifiers

PMID33825680
PMCPMC8075579
OpenAlexW3152436523

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.