Evidence map›Paper›PMID 33824194›Full record

ArticlemSystems2021

Children with Autism and Their Typically Developing Siblings Differ in Amplicon Sequence Variants and Predicted Functions of Stool-Associated Microbes.

Maude M David, Christine Tataru, Jena Daniels, Jessey Schwartz, Jessica Keating, Jarrad Hampton-Marcell, Neil Gottel, Jack A Gilbert, Dennis P Wall

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Maude M DavidDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, California, USA maude.david@oregonstate.edu dpwall@stanford.edu.ORCID https://orcid.org/0000-0003-1561-418X
Christine TataruDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, California, USA.
Jena DanielsDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, California, USA.
Jessey SchwartzDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, California, USA.
Jessica KeatingDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, California, USA.
Jarrad Hampton-MarcellBioscience Division, The Microbiome Center, Argonne National Laboratory, Argonne, Illinois, USA.
Neil GottelBioscience Division, The Microbiome Center, Argonne National Laboratory, Argonne, Illinois, USA.
Jack A GilbertBioscience Division, The Microbiome Center, Argonne National Laboratory, Argonne, Illinois, USA.
Dennis P WallDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, California, USA maude.david@oregonstate.edu dpwall@stanford.edu.
Stanford University · USArgonne National Laboratory · USOregon State University · US

Funding

QuBBD: Wearable artificial intelligence for bid data-driven healthcare in child development R01EB025025 · NIBIB · STANFORD UNIVERSITY · PI WALL, DENNIS PAUL · 2017 to 2019
$1.1M
Evaluation of machine learning to mobilize detection and therapy of developmental delay in childrenR21HD091500 · NICHD · STANFORD UNIVERSITY · PI WALL, DENNIS PAUL · 2017 to 2018
$432k
NIBIB NIH HHS R01 EB025025NICHD NIH HHS R21 HD091500
6 · The paper itself

Abstract

The existence of a link between the gut microbiome and autism spectrum disorder (ASD) is well established in mice, but in human populations, efforts to identify microbial biomarkers have been limited due to a lack of appropriately matched controls, stratification of participants within the autism spectrum, and sample size. To overcome these limitations, we crowdsourced the recruitment of families with age-matched sibling pairs between 2 and 7 years old (within 2 years of each other), where one child had a diagnosis of ASD and the other did not. Parents collected stool samples, provided a home video of their ASD child's natural social behavior, and responded online to diet and behavioral questionnaires. 16S rRNA V4 amplicon sequencing of 117 samples (60 ASD and 57 controls) identified 21 amplicon sequence variants (ASVs) that differed significantly between the two cohorts: 11 were found to be enriched in neurotypical children (six ASVs belonging to the

Indexed as

16S rRNA gene sequencing16S V4 sequencingautism spectrum disorderbutyrateClostridialescrowdsourceLachnospiraceaemicrobiome

Identifiers

PMID33824194
PMCPMC8561662
OpenAlexW3149732512

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.