Evidence map›Paper›PMID 33823137›Full record

ArticleNeuron2021

Specific populations of basal ganglia output neurons target distinct brain stem areas while collateralizing throughout the diencephalon.

Lauren E McElvain, Yuncong Chen, Jeffrey D Moore, G Stefano Brigidi, Brenda L Bloodgood, Byung Kook Lim, Rui M Costa, David Kleinfeld

Abstract read
In one paragraph

Article in Neuron, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. The parafascicular thalamus steers attention to facilitate learning.bioRxiv : the preprint server for biology · 2026
    Article
  11. Article
  12. Multimodal analysis reveals cellular diversity and divergent circuits of the zona incerta.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Dynamic Respiration-Neural Coupling in Substantia Nigra across Sleep and Anesthesia.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  18. Article
  19. Synaptic integration and competition in the substantia nigra pars reticulata-An experimental and in silico analysis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Lauren E McElvainDepartment of Physics, University of California, San Diego, La Jolla, CA 92093, USA; Section of Neurobiology, University of California, San Diego, La Jolla, CA 92093, USA; Champalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Lisbon 1400-038, Portugal.
Yuncong ChenDepartment of Computer Science, University of California, San Diego, La Jolla, CA 92093, USA.
Jeffrey D MooreDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
G Stefano BrigidiSection of Neurobiology, University of California, San Diego, La Jolla, CA 92093, USA.
Brenda L BloodgoodSection of Neurobiology, University of California, San Diego, La Jolla, CA 92093, USA.
Byung Kook LimSection of Neurobiology, University of California, San Diego, La Jolla, CA 92093, USA.
Rui M CostaChampalimaud Neuroscience Programme, Champalimaud Centre for the Unknown, Lisbon 1400-038, Portugal; Zuckerman Institute and Department of Neuroscience, Columbia University, New York, NY 10027, USA. Electronic address: rc3031@columbia.edu.
David KleinfeldDepartment of Physics, University of California, San Diego, La Jolla, CA 92093, USA; Section of Neurobiology, University of California, San Diego, La Jolla, CA 92093, USA. Electronic address: dk@physics.ucsd.edu.

Funding

Top-down and bottom-up signals for flexible orofacial behaviorsU19NS137920 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI David Kleinfeld · 2024 to 2026
$15.9M
Modeling multi-area dynamics during motor controlU19NS104649 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI COSTA, RUI M., WOLPERT, DANIEL · 2017 to 2021
$15.3M
Theory and Modeling of the Orofacial Active SensationU19NS107466 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MITRA, PARTHA PRATIM · 2018 to 2022
$14.9M
Anatomical characterization of neuronal cell types of the mouse brainU01MH114829 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ASCOLI, GIORGIO A, DONG, HONG-WEI · 2017 to 2021
$13.9M
NEUROBIOLOGY TRAINING PROGRAMT32NS007220 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIN, YISHI · 1985 to 2023
$4.5M
Supplement request to: Revealing the connectivity and functionality of brain stem circuitsU01NS090595 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DESCHENES, MARTIN, FREUND, YOAV SHAI · 2014 to 2016
$2.6M
Molecular and Cellular Mechanisms Underlying Activity Dependent Gene Regulation in NeuronsR01NS111162 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BLOODGOOD, BRENDA L · 2020 to 2024
$1.8M
Descending engagement of brainstem neuronal circuits that govern orofacial motor behaviorsK99HD096512 · NICHD · HARVARD UNIVERSITY · PI MOORE, JEFFREY DANIEL · 2018 to 2019
$179k
Howard Hughes Medical InstituteNICHD NIH HHS K99 HD096512NIMH NIH HHS U01 MH114829NINDS NIH HHS R01 NS111162NINDS NIH HHS T32 NS007220NINDS NIH HHS U01 NS090595NINDS NIH HHS U19 NS104649NINDS NIH HHS U19 NS107466NINDS NIH HHS U19 NS137920
6 · The paper itself

Abstract

Basal ganglia play a central role in regulating behavior, but the organization of their outputs to other brain areas is incompletely understood. We investigate the largest output nucleus, the substantia nigra pars reticulata (SNr), and delineate the organization and physiology of its projection populations in mice. Using genetically targeted viral tracing and whole-brain anatomical analysis, we identify over 40 SNr targets that encompass a roughly 50-fold range of axonal densities. Retrograde tracing from the volumetrically largest targets indicates that the SNr contains segregated subpopulations that differentially project to functionally distinct brain stem regions. These subpopulations are electrophysiologically specialized and topographically organized and collateralize to common diencephalon targets, including the motor and intralaminar thalamus as well as the pedunculopontine nucleus and the midbrain reticular formation. These findings establish that SNr signaling is organized as dense, parallel outputs to specific brain stem targets concurrent with extensive collateral branches that encompass the majority of SNr axonal boutons.

Indexed as

AnimalsBasal GangliaBrain StemDiencephalonEvoked PotentialsMiceMice, Inbred C57BLNeural PathwaysNeuronsbrain anatomycircuitelectrophysiologymotor systemmovementsubstantia nigrathalamus

Identifiers

PMID33823137
PMCPMC8169061

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.