Evidence map›Paper›PMID 33822813›Full record

ArticlePloS one2021

Novel gene rearrangement in the mitochondrial genome of Siliqua minima (Bivalvia, Adapedonta) and phylogenetic implications for Imparidentia.

Jiantong Feng, Yahong Guo, Chengrui Yan, Yingying Ye, Xiaojun Yan, Jiji Li, Kaida Xu, Baoying Guo, Zhenming Lü

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jiantong FengNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Yahong GuoNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Chengrui YanNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Yingying YeNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.ORCID 0000-0003-0056-030X
Xiaojun YanNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Jiji LiNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Kaida XuScientific Observing and Experimental Station of Fishery Resources for Key Fishing Grounds, MOA, Key Laboratory of Sustainable Utilization of Technology Research, Marine Fisheries Research Institute of Zhejiang, Zhoushan, China.
Baoying GuoNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Zhenming LüNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.
Zhejiang Ocean University · CNZhejiang Marine Fisheries Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Siliqua minima (Gmelin, 1791) is an important economic shellfish species belonging to the family Pharidae. To date, the complete mitochondrial genome of only one species in this family (Sinonovacula constricta) has been sequenced. Research on the Pharidae family is very limited; to improve the evolution of this bivalve family, we sequenced the complete mitochondrial genome of S. minima by next-generation sequencing. The genome is 17,064 bp in length, consisting of 12 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), and two ribosomal RNA genes (rRNA). From the rearrangement analysis of bivalves, we found that the gene sequences of bivalves greatly variable among species, and with closer genetic relationship, the more consistent of the gene arrangement is higher among the species. Moreover, according to the gene arrangement of seven species from Adapedonta, we found that gene rearrangement among families is particularly obvious, while the gene order within families is relatively conservative. The phylogenetic analysis between species of the superorder Imparidentia using 12 conserved PCGs. The S. minima mitogenome was provided and will improve the phylogenetic resolution of Pharidae species.

Indexed as

BivalviaGene RearrangementGenome, MitochondrialPhylogenyAnimalsRNA, RibosomalRNA, TransferRNA, RibosomalRNA, Transfer

Identifiers

PMID33822813
PMCPMC8023497
OpenAlexW3150626515

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.