Evidence map›Paper›PMID 33821280›Full record

ArticlebioRxiv : the preprint server for biology2021

Severity of SARS-CoV-2 infection as a function of the interferon landscape across the respiratory tract of COVID-19 patients.

Benedetta Sposito, Achille Broggi, Laura Pandolfi, Stefania Crotta, Roberto Ferrarese, Sofia Sisti, Nicola Clementi, Alessandro Ambrosi, Enju Liu, Vanessa Frangipane and 13 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 15 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 3 countries.

Benedetta SpositoHarvard Medical School, Boston Children's Hospital, Division of Immunology, Boston, US.
Achille BroggiHarvard Medical School, Boston Children's Hospital, Division of Immunology, Boston, US.
Laura PandolfiRespiratory Disease Unit IRCCS San Matteo Hospital Foundation, Pavia, Italy.
Stefania CrottaImmunoregulation Laboratory, The Francis Crick Institute, London, UK.
Roberto FerrareseLaboratory of Medical Microbiology and Virology, Vita-Salute San Raffaele University, Milan, Italy.
Sofia SistiLaboratory of Medical Microbiology and Virology, Vita-Salute San Raffaele University, Milan, Italy.
Nicola ClementiLaboratory of Medical Microbiology and Virology, Vita-Salute San Raffaele University, Milan, Italy.
Alessandro AmbrosiFaculty of Medicine and Surgery, Vita-Salute San Raffaele University, Milan, Italy.
Enju LiuHarvard Medical School, Boston Children's Hospital, Division of Gastroenterology, Boston, US.
Vanessa FrangipaneRespiratory Disease Unit IRCCS San Matteo Hospital Foundation, Pavia, Italy.
Laura SaracinoRespiratory Disease Unit IRCCS San Matteo Hospital Foundation, Pavia, Italy.
Laura MarongiuDep. of Biotechnology and Biosciences and Ph.D. program in Molecular and Translational Medicine (DIMET), University of Milano - Bicocca, Milan, Italy.
Fabio A FacchiniDep. of Biotechnology and Biosciences and Ph.D. program in Molecular and Translational Medicine (DIMET), University of Milano - Bicocca, Milan, Italy.
Andrea BottazziDepartment of Anesthesia and Critical Care Medicine, IRCCS Policlinico San Matteo Foundation, Pavia, Italy.
Tommaso FossaliDivision of Anesthesiology and Intensive Care, ASST Fatebenefratelli Sacco, Luigi Sacco Hospital, University of Milan, Milan, Italy.
Riccardo ColomboDivision of Anesthesiology and Intensive Care, ASST Fatebenefratelli Sacco, Luigi Sacco Hospital, University of Milan, Milan, Italy.
Massimo ClementiLaboratory of Medical Microbiology and Virology, Vita-Salute San Raffaele University, Milan, Italy.
Elena TagliabueIRCCS Multimedica, Milan, Italy.
Antonio E PontiroliDepartment of Health Sciences, University of Milan, Milan, Italy.
Federica MeloniRespiratory Disease Unit IRCCS San Matteo Hospital Foundation, Pavia, Italy.
Andreas WackImmunoregulation Laboratory, The Francis Crick Institute, London, UK.
Nicasio ManciniLaboratory of Medical Microbiology and Virology, Vita-Salute San Raffaele University, Milan, Italy.
Ivan ZanoniHarvard Medical School, Boston Children's Hospital, Division of Immunology, Boston, US.
Vita-Salute San Raffaele University · ITBoston University · USIstituti di Ricovero e Cura a Carattere Scientifico · ITUniversity of Milan · ITThe Francis Crick Institute · GBUniversity of Milano-Bicocca · ITBoston Children's Hospital · USMultiMedica · ITPoliclinico San Matteo Fondazione · ITUniversity of Pavia · IT

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
Type III interferon Control of Mucosal ImmunityR01DK115217 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI Scott B Snapper, Ivan Zanoni · 2017 to 2026
$5.6M
Innate control of the inflammatory process during fungal infectionsR01AI121066 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI ZANONI, IVAN · 2016 to 2025
$4.8M
NIAID NIH HHS R01 AI121066NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R01 DK115217Wellcome Trust FC001206
6 · The paper itself

Abstract

The COVID-19 outbreak driven by SARS-CoV-2 has caused more than 2.5 million deaths globally, with the most severe cases characterized by over-exuberant production of immune-mediators, the nature of which is not fully understood. Interferons of the type I (IFN-I) or type III (IFN-III) families are potent antivirals, but their role in COVID-19 remains debated. Our analysis of gene and protein expression along the respiratory tract shows that IFNs, especially IFN-III, are over-represented in the lower airways of patients with severe COVID-19, while high levels of IFN-III, and to a lesser extent IFN-I, characterize the upper airways of patients with high viral burden but reduced disease risk or severity; also, IFN expression varies with abundance of the cell types that produce them. Our data point to a dynamic process of inter- and intra-family production of IFNs in COVID-19, and suggest that IFNs play opposing roles at distinct anatomical sites.

Identifiers

PMID33821280
PMCPMC8020981
OpenAlexW3141221477

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.