Evidence map›Paper›PMID 33820778›Full record

Trial reportCancer discovery2021

Integrative Bulk and Single-Cell Profiling of Premanufacture T-cell Populations Reveals Factors Mediating Long-Term Persistence of CAR T-cell Therapy.

Gregory M Chen, Changya Chen, Rajat K Das, Peng Gao, Chia-Hui Chen, Shovik Bandyopadhyay, Yang-Yang Ding, Yasin Uzun, Wenbao Yu, Qin Zhu and 4 more

Open access · greenAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Cancer discovery, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 148 papers.

0numbers the graph read from it
0cells of the map it votes in
148citing papers in PubMed
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

148 citing papers in PubMed, 196 citations in OpenAlex.

  1. Trial
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  10. Mapping clinical CAR-T cells: insights from scRNA-seq.Trends in molecular medicine · 2026
    Review
  11. Article
  12. Review
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  20. CAR-T cells with the CD38Cell reports. Medicine · 2026
    Article

88 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Gregory M Chen *Graduate Group in Genomics and Computational Biology, University of Pennsylvania, Philadelphia, Pennsylvania.
Changya Chen *Center for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Rajat K Das *Center for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Peng GaoCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.ORCID 0000-0002-7785-2389
Chia-Hui ChenCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Shovik BandyopadhyayGraduate Group in Cellular and Molecular Biology, University of Pennsylvania, Philadelphia, Pennsylvania.ORCID 0000-0003-3919-3914
Yang-Yang DingCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.ORCID 0000-0003-1588-2571
Yasin UzunCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Wenbao YuCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Qin ZhuGraduate Group in Genomics and Computational Biology, University of Pennsylvania, Philadelphia, Pennsylvania.
Regina M MyersCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Stephan A GruppCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
David M BarrettCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania. tank1@chop.edu david.barrett@tmunity.com.
Kai TanCenter for Childhood Cancer Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania. tank1@chop.edu david.barrett@tmunity.com.ORCID 0000-0002-9104-5567
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007170 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BRASS, LAWRENCE F · 1985 to 2022
$54.0M
HEMATOLOGY CLINICAL RESEARCH TRAINING PROGRAMT32HL007439 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI LAWRENCE F BRASS, PETER S KLEIN · 1985 to 2026
$17.1M
Physician Scientist Training in Clinical OncologyK12CA076931 · NCI · UNIVERSITY OF PENNSYLVANIA · PI STEPHEN Patrick HUNGER, LYNN M. SCHUCHTER · 1997 to 2026
$16.5M
Data Analysis UnitU2CCA233285 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI HUNGER, STEPHEN PATRICK, TAN, KAI · 2018 to 2023
$13.2M
T32 Institutional Pediatric ResearchT32HD043021 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI Joseph W. St. Geme · 2002 to 2026
$6.4M
Defining and overcoming intrinsic T cell dysfunction to enable pediatric immunotherapyU01CA232361 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI GRUPP, STEPHAN A., WEBER, EVAN WILLIAM · 2019 to 2019
$3.7M
CIHR 433117Doris Duke Charitable Foundation 2016089NCI NIH HHS K12 CA076931NCI NIH HHS L40 CA242807NCI NIH HHS U01 CA232361NCI NIH HHS U2C CA233285NHLBI NIH HHS T32 HL007439NICHD NIH HHS T32 HD043021NIGMS NIH HHS T32 GM007170
6 · The paper itself

Abstract

The adoptive transfer of chimeric antigen receptor (CAR) T cells represents a breakthrough in clinical oncology, yet both between- and within-patient differences in autologously derived T cells are a major contributor to therapy failure. To interrogate the molecular determinants of clinical CAR T-cell persistence, we extensively characterized the premanufacture T cells of 71 patients with B-cell malignancies on trial to receive anti-CD19 CAR T-cell therapy. We performed RNA-sequencing analysis on sorted T-cell subsets from all 71 patients, followed by paired Cellular Indexing of Transcriptomes and Epitopes (CITE) sequencing and single-cell assay for transposase-accessible chromatin sequencing (scATAC-seq) on T cells from six of these patients. We found that chronic IFN signaling regulated by

Indexed as

Immunotherapy, AdoptiveAdolescentChildDisease-Free SurvivalFemaleHumansLeukemia, Lymphocytic, Chronic, B-CellMalePhiladelphiaReceptors, Chimeric AntigenT-LymphocytesReceptors, Chimeric Antigen

Identifiers

PMID33820778
PMCPMC8419030
OpenAlexW3151543485

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.