Evidence map›Paper›PMID 33817627›Full record

ArticleCurrent research in immunology2020

Protein interactome of the Cancerous Inhibitor of protein phosphatase 2A (CIP2A) in Th17 cells.

Mohd Moin Khan, Tommi Välikangas, Meraj Hasan Khan, Robert Moulder, Ubaid Ullah, Santosh Dilip Bhosale, Elina Komsi, Umar Butt, Xi Qiao, Jukka Westermarck and 2 more

Open access · goldAbstract read
In one paragraph

Article in Current research in immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Mohd Moin KhanTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Tommi VälikangasTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Meraj Hasan KhanTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Robert MoulderTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Ubaid UllahTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Santosh Dilip BhosaleTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Elina KomsiTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Umar ButtTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Xi QiaoTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Jukka WestermarckTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Laura L EloTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Riitta LahesmaaTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Turku Centre for Computer Science · FIUniversity of Turku · FIÅbo Akademi University · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancerous inhibitor of protein phosphatase 2A (CIP2A) is involved in immune response, cancer progression, and Alzheimer's disease. However, an understanding of the mechanistic basis of its function in this wide spectrum of physiological and pathological processes is limited due to its poorly characterized interaction networks. Here we present the first systematic characterization of the CIP2A interactome by affinity-purification mass spectrometry combined with validation by selected reaction monitoring targeted mass spectrometry (SRM-MS) analysis in T helper (Th) 17 (Th17) cells. In addition to the known regulatory subunits of protein phosphatase 2A (PP2A), the catalytic subunits of protein PP2A were found to be interacting with CIP2A. Furthermore, the regulatory (PPP1R18, and PPP1R12A) and catalytic (PPP1CA) subunits of phosphatase PP1 were identified among the top novel CIP2A interactors. Evaluation of the ontologies associated with the proteins in this interactome revealed that they were linked with RNA metabolic processing and splicing, protein traffic, cytoskeleton regulation and ubiquitin-mediated protein degradation processes. Taken together, this network of protein-protein interactions will be important for understanding and further exploring the biological processes and mechanisms regulated by CIP2A both in physiological and pathological conditions.

Indexed as

CIP2AConfocal microscopyInteractomeMass Spectrometry (MS)Pathway analysisSelected Reaction Monitoring (SRM) targeted mass spectrometry

Identifiers

PMID33817627
PMCPMC8008788
OpenAlexW3029838489

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.