Evidence map›Paper›PMID 33815307›Full record

ArticleFrontiers in microbiology2021

Genomic Feature Analysis of Betacoronavirus Provides Insights Into SARS and COVID-19 Pandemics.

Xin Li, Jia Chang, Shunmei Chen, Liangge Wang, Tung On Yau, Qiang Zhao, Zhangyong Hong, Jishou Ruan, Guangyou Duan, Shan Gao

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  7. Article
  8. Review
  9. Article
  10. Breastfeeding during the COVID-19 pandemic.Frontiers in pediatrics · 2023
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. [SARS-CoV-2 with transcription regulatory sequence motif mutation poses a greater threat].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2022
    Article
  16. Article
  17. SARS-CoV-2 and the Nucleus.International journal of biological sciences · 2022
    Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Xin LiCollege of Life Sciences, Nankai University, Tianjin, China.
Jia ChangCollege of Life Sciences, Nankai University, Tianjin, China.
Shunmei ChenYunnan Key Laboratory of Stem Cell and Regenerative Medicine, Biomedical Engineering Research Center, Kunming Medical University, Kunming, China.
Liangge WangTaikang Xianlin Drum Tower Hospital, Nanjing University School of Medicine, Nanjing, China.
Tung On YauJohn Van Geest Cancer Research Centre, School of Science and Technology, Nottingham Trent University, Nottingham, United Kingdom.
Qiang ZhaoCollege of Life Sciences, Nankai University, Tianjin, China.
Zhangyong HongCollege of Life Sciences, Nankai University, Tianjin, China.
Jishou RuanSchool of Mathematical Sciences, Nankai University, Tianjin, China.
Guangyou DuanSchool of Life Sciences, Qilu Normal University, Jinan, China.
Shan GaoCollege of Life Sciences, Nankai University, Tianjin, China.
Nankai University · CNKunming Medical University · CNNanjing Drum Tower Hospital · CNNottingham Trent University · GBQilu Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In December 2019, the world awoke to a new betacoronavirus strain named severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). Betacoronavirus consists of A, B, C and D subgroups. Both SARS-CoV and SARS-CoV-2 belong to betacoronavirus subgroup B. In the present study, we divided betacoronavirus subgroup B into the SARS1 and SARS2 classes by six key insertions and deletions (InDels) in betacoronavirus genomes, and identified a recently detected betacoronavirus strains RmYN02 as a recombinant strain across the SARS1 and SARS2 classes, which has potential to generate a new strain with similar risk as SARS-CoV and SARS-CoV-2. By analyzing genomic features of betacoronavirus, we concluded: (1) the jumping transcription and recombination of CoVs share the same molecular mechanism, which inevitably causes CoV outbreaks; (2) recombination, receptor binding abilities, junction furin cleavage sites (FCSs), first hairpins and

Indexed as

furin cleavage siteMERS-CoVORF8recombinationSARS-CoV-2

Identifiers

PMID33815307
PMCPMC8010690
OpenAlexW3136780307

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.